mite_data - v1.16

[1.16] 05-08-2025

Changed

• Implemented additional tests for metadata_mibig.json file

- Python
Published by mmzdouc 10 months ago

mite_data - v1.15

[1.15] 26-07-2025

Changed

• Adjusted versions of mite_extas and mite_schema

- Python
Published by mmzdouc 11 months ago

mite_data - v1.14

[1.14] 25-07-2025

Added

• 06-25 data update
• added cofactor info

Changed

• CI/CD: full check only on merge to main
• CI/CD: pull requests into main only check updated files

- Python
Published by mmzdouc 11 months ago

mite_data - v1.13

[1.13] 02-06-2025

Added

• 03/04/05-25 data update

- Python
Published by mmzdouc about 1 year ago

mite_data - v1.12

[1.12] 02-03-25

Added

• 02-25 data update

Changed

• Changed collaboration documents to organization-level ones

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.11

[1.11] 13-02-2025

Changed

• Fixed format of CFF file

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.10

[1.10] 13-02-2025

Added

• Added entries for 01-25 data update

Changed

• Changed the license from "MIT" to "CC0" where applicable

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.9

[1.9] 02-01-2025

Added

• Added entries for 12-24 data update
• Automated fasta-file download via pre-commit

Changed

• Moved BLAST-library, .pdb-files, and enzyme visualizations to mite_web

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.8

[1.8] 08-12-2024

Bugfix

• Fixed error in BLAST library creation

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.7

[1.7] 07-12-2024

Added

• Completed review of entries

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.6

[1.6] 30-11-2024

Bugfix

• Fixed two entries with erroneous MITE ID

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.5

[1.5] 30-11-2024

Added

• Update data: November-release 1.5
• Added "metadata_cytoscape.csv" to provide metadata for sequence similarity networks (fasta-files)

Changed

• Pinned mite_schema and mite_data dependencies
• Replaced old IDs with ORCIDs
• Update metadata_mibig.json: changed nesting to accommodate multiple mite entries per mibig bgc

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.4

[1.4] 09-11-2024

Changed

• Updated entries to adhere to MITE schema version 1.5.1

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.3

[1.3] 21-10-2024

Changed

• FASTA files are now named after the MITE entry they describe
• The header of FASTA file now contains >{MITE accession} {genpept_id/uniprotkb_id/uniparc_id} to keep track from where the file originates

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.2

[1.2] 19-10-2024

Changed

• Updated entries to adhere to MITE schema version 1.4
• All entries now pass automated checks of mite_extras
• Added the "Automated checks passed" reviewer ID BBBBBBBBBBBBBBBBBBBBBBBB
• Set the status of all entries to active
• Merged duplicate entries and retired them
• Reworked project structure
• Complete rework of mite_data CLI
• Added functionality to automatically generate metadata for MITE entries
• Added functionality to download protein FASTA files and build a BLAST DB
• Added functionality to update MITE entries to the newest version of mite_schema
• Added a CI/CD pipeline to auto-check MITE entries at every commit

- Python
Published by mmzdouc over 1 year ago

mite_data - v1.1

[1.1] 11-08-2024

Added

• Updated entries to adhere to MITE schema version 1.3

- Python
Published by mmzdouc almost 2 years ago