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data-visulaization-heatmaps

https://github.com/samrajb/data-visulaization-heatmaps

Science Score: 44.0%

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    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
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    .zenodo.json file
    Found .zenodo.json file
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    Scientific vocabulary similarity
    Low similarity (5.5%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: SamrajB
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 9.77 KB
Statistics
  • Stars: 0
  • Watchers: 0
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created 7 months ago · Last pushed 7 months ago
Metadata Files
Readme License Citation

README.md

🔥 Data Visualization Using pyComplexHeatmap in Python

This project demonstrates advanced heatmap visualizations using the pyComplexHeatmap library in Python. Inspired by the R package ComplexHeatmap, this tool allows hierarchical clustering, annotations, and custom styling, making it ideal for visualizing complex datasets such as gene expression, correlation matrices, and performance metrics.

📌 Features

  • 📊 Clustered heatmaps (rows and columns)
  • 🏷️ Row and column annotations (labels, groupings)
  • 🎨 Custom color maps
  • 🖼️ Publication-ready, high-resolution plots
  • 🧠 Perfect for biological, financial, or academic data

🛠️ Tech Stack

| Tool | Purpose | |------------------|-------------------------------| | Python 3.x | Programming Language | | Pandas | Data Manipulation | | NumPy | Numerical Processing | | Matplotlib | Plot Rendering | | pyComplexHeatmap | Complex Heatmap Generation |

Owner

  • Name: Samraj B
  • Login: SamrajB
  • Kind: user

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Ding"
  given-names: "Wubin"
  orcid: "https://orcid.org/0000-0002-5355-7561"
- family-names: "Goldberg"
  given-names: "David"
  orcid: ""
- family-names: "Zhou"
  given-names: "Wanding"
  orcid: "https://orcid.org/0000-0001-9126-1932"
title: "PyComplexHeatmap: A Python package to visualize multimodal genomics data"
version: 1.5.0
doi: "10.1002/imt2.115"
date-released: 2023-05-25
url: "https://github.com/DingWB/PyComplexHeatmap"
preferred-citation:
  type: article
  authors:
  - family-names: "Ding"
    given-names: "Wubin"
    orcid: "https://orcid.org/0000-0002-5355-7561"
  - family-names: "Goldberg"
    given-names: "David"
  - family-names: "Zhou"
    given-names: "Wanding"
    orcid: "https://orcid.org/0000-0001-9126-1932"
  doi: "10.1002/imt2.115"
  journal: "iMeta"
  month: 05
  start: 1 # First page number
  end: 10 # Last page number
  title: "PyComplexHeatmap: A Python package to visualize multimodal genomics data"
  issue: 1
  volume: 1
  year: 2023

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Dependencies

pyproject.toml pypi
  • matplotlib *
  • numpy *
  • palettable *
  • pandas >=1.3.5
  • scipy *
setup.py pypi
  • matplotlib *