pangenomics
Pangenome Analysis in Prokaryotes Lesson
Science Score: 67.0%
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✓CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.7%) to scientific vocabulary
Keywords
beta
carpentries-incubator
english
lesson
pangenomics
python
Keywords from Contributors
carpentries-lab
life-sciences
metagenomics
stable
pre-alpha
alpha
genome-mining
project-organization
comparative-genomics
pangenomic-analysis
Last synced: 6 months ago
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JSON representation
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Repository
Pangenome Analysis in Prokaryotes Lesson
Basic Info
- Host: GitHub
- Owner: carpentries-incubator
- License: other
- Language: Python
- Default Branch: gh-pages
- Homepage: https://carpentries-incubator.github.io/pangenomics/
- Size: 16.5 MB
Statistics
- Stars: 13
- Watchers: 6
- Forks: 7
- Open Issues: 14
- Releases: 0
Topics
beta
carpentries-incubator
english
lesson
pangenomics
python
Created over 4 years ago
· Last pushed over 1 year ago
Metadata Files
Readme
Contributing
Funding
License
Code of conduct
Citation
Authors
README.md
Zenodo link: 
Pangenome Analysis in Prokaryotes Lesson
This lesson is part of the Pangenomics Workshop.
Pangenome Analysis in Prokaryotes Lesson
Contribution
Make a suggestion or correct an error by raising an Issue.
Code of Conduct
All participants should agree to abide by the Data Carpentry Code of Conduct.
Maintainer(s)
Current maintainers of this lesson are
- Nelly Selem Mojica
- Claudia Zirion Martinez
- Shaday Guerrero Flores
- Jose Abel Lovaco Flores
- Paulina Mayell Mejía Ponce
- Haydeé Peruyero
- Marisol Navarro Miranda
- Úrsula Abad
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
Please cite as:
FIXME 💢
Owner
- Name: carpentries-incubator
- Login: carpentries-incubator
- Kind: organization
- Repositories: 107
- Profile: https://github.com/carpentries-incubator
Citation (CITATION)
FIXME: describe how to cite this lesson.
GitHub Events
Total
- Watch event: 2
Last Year
- Watch event: 2
Committers
Last synced: 6 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Claudia Zirión Martínez | 7****n | 303 |
| Nelly Sélem | n****5@h****m | 210 |
| Haydee Peruyero | h****o@g****m | 127 |
| Paulina Mayell | p****l@g****m | 118 |
| Shaday Guerrero | s****o@g****m | 105 |
| J. Abel Lovaco | 6****4 | 83 |
| aursula | 5****a | 48 |
| Kadkam8a | 9****a | 44 |
| andrespan | 1****n | 37 |
| aaronejaime | 4****e | 30 |
| anton-pashkov | 9****v | 14 |
| MSc Axel Alejandro Ramos García | a****7@g****m | 13 |
| aapashkov | p****v@c****x | 12 |
| FranciscoSNR | 8****R | 10 |
| Marisol Navarro-Miranda | 3****s | 9 |
| Anton Pashkov | 9****v | 5 |
| solnavss | 4 | |
| Andres Cumsille | 3****M | 1 |
| Rafael Pérez | 6****e | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 71
- Total pull requests: 4
- Average time to close issues: 3 months
- Average time to close pull requests: 1 day
- Total issue authors: 5
- Total pull request authors: 2
- Average comments per issue: 0.93
- Average comments per pull request: 0.0
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 22
- Pull requests: 2
- Average time to close issues: 12 days
- Average time to close pull requests: 2 days
- Issue authors: 3
- Pull request authors: 1
- Average comments per issue: 0.27
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- Czirion (32)
- nselem (24)
- aursula (3)
- HaydeePeruyero (1)
- shadayguerrero (1)
Pull Request Authors
- AndresICM (2)
- FranciscoSNR (1)
Top Labels
Issue Labels
Episode improvement (3)
pending (2)
high priority (1)
global (1)
Pull Request Labels
Dependencies
.github/workflows/template.yml
actions
- actions/cache v1 composite
- actions/checkout master composite
- actions/setup-python v2 composite
- actions/setup-ruby main composite
- r-lib/actions/setup-r master composite
.github/workflows/website.yml
actions
- actions/cache v1 composite
- actions/checkout master composite
- actions/setup-python v2 composite
- actions/setup-ruby v1 composite
- r-lib/actions/setup-r master composite
Gemfile
rubygems
- github-pages >= 0 development