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sc-tutorials

SC Tutorials

https://github.com/supercontainers/sc-tutorials

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    2 of 4 committers (50.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (10.9%) to scientific vocabulary

Keywords from Contributors

singularity-container singularity shifter supercomputer
Last synced: 11 months ago · JSON representation

Repository

SC Tutorials

Basic Info
  • Host: GitHub
  • Owner: supercontainers
  • License: other
  • Language: C++
  • Default Branch: sc24
  • Size: 49.1 MB
Statistics
  • Stars: 3
  • Watchers: 7
  • Forks: 8
  • Open Issues: 1
  • Releases: 0
Created almost 5 years ago · Last pushed over 1 year ago
Metadata Files
Readme Contributing License Citation Authors

README.md

Getting Started with Containers on HPC

View this on the Tutorial Homepage.

HPC Containers Tutorial Session

Details

Full-day Tutorial Session

Venue: Supercomputing Conference (SC 24)

Location: Atlanta, GA, USA

Link: SC 2024 Tutorial Details

Keywords: Containerized HPC, System Software and Runtime Systems, Scientific Software Development, DevOps

Abstract

Within just the past few years, the use of containers has revolutionized the way in which industries and enterprises have developed and deployed computational software and distributed systems. The containerization model has gained traction within the HPC community as well with the promise of improved reliability, reproducibility, portability, and levels of customization that were previously not possible on supercomputers. This adoption has been enabled by a number of HPC Container runtimes that have emerged including Singularity, Shifter, Enroot, Charliecloud and others.

This hands-on tutorial looks to train users on the usability of containers on HPC resources. We will provide a detailed background on Linux containers, along with introductory hands-on experience building a container image, sharing the container and running it on a HPC cluster. Furthermore, the tutorial will provide more advanced information on how to run MPI-based and GPU-enabled HPC applications, how to optimize I/O intensive workflows, and how to setup GUI enabled interactive sessions. Cutting-edge examples will include machine learning and bioinformatics. Users will leave the tutorial with a solid foundational understanding of how to utilize containers with HPC resources through Shifter and Singularity, as well as an in-depth knowledge to deploy custom containers on their own resources.

Prerequisites

Please consult the website for prerequisites and recommended setup steps.

Questions

You can ask questions verbally or with this Google Doc. Please append your question below the others in the document.

We have also created a Slack Team for this. The invitation link is here.

Schedule - Autogenerated from the metadata

Owner

  • Name: Supercontainers
  • Login: supercontainers
  • Kind: organization
  • Email: ecp-supercontainers@software.sandia.gov

GitHub Events

Total
  • Watch event: 1
  • Issue comment event: 1
  • Push event: 17
  • Pull request event: 2
  • Fork event: 1
  • Create event: 1
Last Year
  • Watch event: 1
  • Issue comment event: 1
  • Push event: 17
  • Pull request event: 2
  • Fork event: 1
  • Create event: 1

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 102
  • Total Committers: 4
  • Avg Commits per committer: 25.5
  • Development Distribution Score (DDS): 0.5
Past Year
  • Commits: 23
  • Committers: 2
  • Avg Commits per committer: 11.5
  • Development Distribution Score (DDS): 0.043
Top Committers
Name Email Commits
Shane Canon s****n@l****v 51
Marco De La Pierre m****e@g****m 42
Maciej Cytowski 3****i 8
Sameer Shende s****r@c****u 1
Committer Domains (Top 20 + Academic)
cs.uoregon.edu: 1 lbl.gov: 1

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 0
  • Total pull requests: 8
  • Average time to close issues: N/A
  • Average time to close pull requests: 12 days
  • Total issue authors: 0
  • Total pull request authors: 4
  • Average comments per issue: 0
  • Average comments per pull request: 0.38
  • Merged pull requests: 7
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 1 minute
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 1.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • mcytowski (5)
  • Me-Basha (2)
  • marcodelapierre (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

exercises/compose/codimd/docker-compose.yml docker
  • hackmdio/hackmd 2.1.0-cjk
  • postgres 11.6-alpine
exercises/compose/rstudio/docker-compose.yml docker
  • rocker/tidyverse latest
exercises/mpihello/Dockerfile docker
  • nersc/ubuntu-mpi 18.04 build
exercises/spack_containerize/Dockerfile docker
  • centos 7 build
  • quay.io/eduardoarango/spack path build
requirements.txt pypi
  • PyYAML *