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scikit-image

Image processing in Python

https://github.com/scikit-image/scikit-image

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    66 of 649 committers (10.2%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (7.5%) to scientific vocabulary

Keywords

computer-vision image-processing python

Keywords from Contributors

closember qt gtk tk wx alignment flexible astronomy napari astropy
Last synced: 6 months ago · JSON representation

Repository

Image processing in Python

Basic Info
  • Host: GitHub
  • Owner: scikit-image
  • License: other
  • Language: Python
  • Default Branch: main
  • Homepage: https://scikit-image.org
  • Size: 78.1 MB
Statistics
  • Stars: 6,330
  • Watchers: 181
  • Forks: 2,309
  • Open Issues: 852
  • Releases: 0
Topics
computer-vision image-processing python
Created over 14 years ago · Last pushed 6 months ago
Metadata Files
Readme Contributing License Code of conduct Citation Security Support

README.md

scikit-image: Image processing in Python

Image.sc forum Stackoverflow project chat Scientific Python Ecosystem Coordination

Installation

  • pip: pip install scikit-image
  • conda: conda install -c conda-forge scikit-image

Also see installing scikit-image.

License

See LICENSE.txt.

Citation

If you find this project useful, please cite:

Stfan van der Walt, Johannes L. Schnberger, Juan Nunez-Iglesias, Franois Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu, and the scikit-image contributors. scikit-image: Image processing in Python. PeerJ 2:e453 (2014) https://doi.org/10.7717/peerj.453

Owner

  • Name: Image Processing Toolbox for SciPy
  • Login: scikit-image
  • Kind: organization

Committers

Last synced: 8 months ago

All Time
  • Total Commits: 11,985
  • Total Committers: 649
  • Avg Commits per committer: 18.467
  • Development Distribution Score (DDS): 0.886
Past Year
  • Commits: 261
  • Committers: 39
  • Avg Commits per committer: 6.692
  • Development Distribution Score (DDS): 0.678
Top Committers
Name Email Commits
Johannes Schönberger j****h@d****e 1,361
Stefan van der Walt s****v@b****u 1,144
Juan Nunez-Iglesias j****n@u****u 828
Steven Silvester s****r@i****g 625
Tony S Yu t****u@t****l 601
François Boulogne f****g 543
Gregory R. Lee g****7@g****m 522
Mark Harfouche m****e@g****m 359
Lars Grüter l****u@m****g 338
Jarrod Millman j****n@g****m 305
Vighnesh Birodkar v****r@g****m 281
Olivier Debeir o****r@u****e 248
emmanuelle e****t@n****g 232
Ankit Agrawal a****l@i****n 227
Marianne Corvellec m****c@e****g 174
Jostein Bø Fløystad j****d@g****m 144
Riadh Fezzani r****i@g****m 128
Riadh r****i@v****m 124
cgohlke c****e@u****u 120
Josh Warner (Mac) w****a@m****u 116
Egor Panfilov e****v@g****m 110
Andreas Mueller a****r@a****e 106
ThomasWalter t****r@m****r 99
François Boulogne f****e@s****g 98
Egor Panfilov m****d@g****m 87
sccolbert s****t@g****m 75
dan w****s@g****m 73
leGIT-bot s****h@g****m 62
Dave Mellert D****t@j****g 48
Almar Klein a****n@g****m 47
and 619 more...
Committer Domains (Top 20 + Academic)
berkeley.edu: 7 enthought.com: 3 janelia.hhmi.org: 3 srand.fr: 2 wisc.edu: 2 kitware.com: 2 stanford.edu: 2 163.com: 2 seznam.cz: 2 qq.com: 2 localhost.localdomain: 2 mines-paristech.fr: 2 fmi.ch: 2 hawaii.edu: 2 ubuntu.(none): 2 yandex.ru: 2 rtwilson.com: 2 mail.ru: 2 inria.fr: 2 ulb.ac.be: 2 ieee.org: 2 neuro.mpg.de: 1 biomedia11.doc.ic.ac.uk: 1 tamu.edu: 1 ic.ac.uk: 1 students.iiit.ac.in: 1 ed.ac.uk: 1 wpi.edu: 1 caltech.edu: 1 colgate.edu: 1 is.mpg.de: 1 dlr.de: 1 csiro.au: 1 cam.ac.uk: 1 imm.dtu.dk: 1 dip.sun.ac.za: 1 ais.uni-bonn.de: 1 mayo.edu: 1 uci.edu: 1 iitb.ac.in: 1 unimelb.edu.au: 1 cern.ch: 1 umich.edu: 1 iwr.uni-heidelberg.de: 1 gemini.edu: 1 umn.edu: 1 visor.udg.edu: 1 fz-juelich.de: 1 alum.mit.edu: 1 g.ucla.edu: 1 ntu.edu.tw: 1 ist.ac.at: 1 sms.ed.ac.uk: 1 airbears2-10-142-59-249.airbears2.1918.berkeley.edu: 1 kit.edu: 1 predict5.doc.ic.ac.uk: 1 rwth-aachen.de: 1 calpoly.edu: 1 email.arizona.edu: 1 imperial.ac.uk: 1 mail.huji.ac.il: 1 maclaurin-twelve-sixty-six.mit.edu: 1 airbears2-10-142-58-134.airbears2.1918.berkeley.edu: 1 jhu.edu: 1 sheffield.ac.uk: 1 bnl.gov: 1 uga.edu: 1 broadinstitute.org: 1 mnsu.edu: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 586
  • Total pull requests: 1,111
  • Average time to close issues: 7 months
  • Average time to close pull requests: 2 months
  • Total issue authors: 305
  • Total pull request authors: 215
  • Average comments per issue: 4.21
  • Average comments per pull request: 3.86
  • Merged pull requests: 655
  • Bot issues: 16
  • Bot pull requests: 13
Past Year
  • Issues: 127
  • Pull requests: 403
  • Average time to close issues: 18 days
  • Average time to close pull requests: 15 days
  • Issue authors: 60
  • Pull request authors: 56
  • Average comments per issue: 1.23
  • Average comments per pull request: 2.12
  • Merged pull requests: 212
  • Bot issues: 16
  • Bot pull requests: 4
View more stats
Top Authors
Issue Authors
  • lagru (84)
  • stefanv (45)
  • jni (21)
  • github-actions[bot] (16)
  • mkcor (12)
  • grlee77 (12)
  • jarrodmillman (11)
  • sciunto (10)
  • soupault (9)
  • olebole (8)
  • tokiAi (6)
  • patquem (5)
  • haesleinhuepf (5)
  • m-albert (4)
  • anntzer (4)
Pull Request Authors
  • lagru (229)
  • jarrodmillman (181)
  • stefanv (131)
  • mkcor (56)
  • decorouz (22)
  • michaelbratsch (18)
  • matthew-brett (16)
  • grlee77 (15)
  • Schefflera-Arboricola (14)
  • pre-commit-ci[bot] (13)
  • matthewfeickert (12)
  • agriyakhetarpal (12)
  • spdfghi (11)
  • hmaarrfk (10)
  • ana42742 (10)
Top Labels
Issue Labels
:bug: Bug (301) :pray: Feature request (92) :sleeping: Dormant (70) :page_facing_up: type: Documentation (56) :robot: type: Infrastructure (37) :beginner: Good first issue (24) :speech_balloon: Discussion (23) :scroll: type: API (23) :wrench: type: Maintenance (23) :people_hugging: Support (22) :hiking_boot: Path to skimage2 (16) CI failure (15) :fast_forward: type: Enhancement (14) :question: Needs info (11) :balance_scale: Needs decision (10) :ice_cube: Backburner (10) :computer: Specific arch failure (9) :chart_with_upwards_trend: type: Performance (8) :warning: Priority (8) :arrow_up: Upstream (7) :warning: Critical (7) :bulb: Solution identified (6) :arrow_down_small: Deprecation (4) :runner: Sprint (3) :thinking: Planning (3) :scroll: API (3) :computer: Arch specific (3) :chart_with_upwards_trend: Performance (2) 🔔 CI failure (2) coordinate convention (2)
Pull Request Labels
:wrench: type: Maintenance (316) :page_facing_up: type: Documentation (197) :robot: type: Infrastructure (141) :adhesive_bandage: type: Bug fix (66) :scroll: type: API (62) :rocket: Quick win (43) :hiking_boot: Path to skimage2 (40) :fast_forward: type: Enhancement (39) :baby: type: New feature (38) :arrow_down_small: Deprecation (34) :pray: Feature request (30) :chart_with_upwards_trend: type: Performance (29) :wave: Outreachy (23) :monocle_face: Needs review (22) :muscle: Work in progress (18) :wrench: Maintenance (18) :sleeping: Dormant (18) :+1: 1st approval (17) :adhesive_bandage: Bug fix (12) :warning: Priority (11) :page_facing_up: Documentation (9) :balance_scale: Needs decision (8) :robot: Infrastructure (8) :speech_balloon: Discussion (6) ⚽ Contributor's ball (5) :arrow_up: Upstream (5) :sos: To take over (5) :trophy: type: Highlight (4) :computer: Specific arch failure (4) :+1: OK to merge (4)

Packages

  • Total packages: 7
  • Total downloads:
    • pypi 15,936,015 last-month
  • Total docker downloads: 402,579,164
  • Total dependent packages: 2,406
    (may contain duplicates)
  • Total dependent repositories: 41,964
    (may contain duplicates)
  • Total versions: 112
  • Total maintainers: 5
pypi.org: scikit-image

Image processing in Python

  • Documentation: https://scikit-image.readthedocs.io/
  • License: Files: * Copyright: 2009-2022 the scikit-image team License: BSD-3-Clause Files: doc/source/themes/scikit-image/layout.html Copyright: 2007-2010 the Sphinx team License: BSD-3-Clause Files: skimage/feature/_canny.py skimage/filters/edges.py skimage/filters/_rank_order.py skimage/morphology/_skeletonize.py skimage/morphology/tests/test_watershed.py skimage/morphology/watershed.py skimage/segmentation/heap_general.pxi skimage/segmentation/heap_watershed.pxi skimage/segmentation/_watershed.py skimage/segmentation/_watershed_cy.pyx Copyright: 2003-2009 Massachusetts Institute of Technology 2009-2011 Broad Institute 2003 Lee Kamentsky 2003-2005 Peter J. Verveer License: BSD-3-Clause Files: skimage/filters/thresholding.py skimage/graph/_mcp.pyx skimage/graph/heap.pyx Copyright: 2009-2015 Board of Regents of the University of Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck Institute of Molecular Cell Biology and Genetics 2009 Zachary Pincus 2009 Almar Klein License: BSD-2-Clause File: skimage/morphology/grayreconstruct.py skimage/morphology/tests/test_reconstruction.py Copyright: 2003-2009 Massachusetts Institute of Technology 2009-2011 Broad Institute 2003 Lee Kamentsky License: BSD-3-Clause File: skimage/morphology/_grayreconstruct.pyx Copyright: 2003-2009 Massachusetts Institute of Technology 2009-2011 Broad Institute 2003 Lee Kamentsky 2022 Gregory Lee (added a 64-bit integer variant for large images) License: BSD-3-Clause File: skimage/segmentation/_expand_labels.py Copyright: 2020 Broad Institute 2020 CellProfiler team License: BSD-3-Clause File: skimage/exposure/_adapthist.py Copyright: 1994 Karel Zuiderveld License: BSD-3-Clause Function: skimage/morphology/_skeletonize_various_cy.pyx:_skeletonize_loop Copyright: 2003-2009 Massachusetts Institute of Technology 2009-2011 Broad Institute 2003 Lee Kamentsky License: BSD-3-Clause Function: skimage/_shared/version_requirements.py:_check_version Copyright: 2013 The IPython Development Team License: BSD-3-Clause Function: skimage/_shared/version_requirements.py:is_installed Copyright: 2009-2011 Pierre Raybaut License: MIT File: skimage/feature/_fisher_vector.py Copyright: 2014 2014 Dan Oneata License: MIT File: skimage/_vendored/numpy_lookfor.py Copyright: 2005-2023, NumPy Developers License: BSD-3-Clause File: skimage/transform/_thin_plate_splines.py Copyright: 2007 Zachary Pincus License: BSD-3-Clause License: BSD-2-Clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. . THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. License: BSD-3-Clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither the name of the University nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. . THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
  • Latest release: 0.25.2
    published about 1 year ago
  • Versions: 67
  • Dependent Packages: 2,091
  • Dependent Repositories: 38,464
  • Downloads: 15,907,231 Last month
  • Docker Downloads: 402,579,132
Rankings
Dependent packages count: 0.0%
Dependent repos count: 0.0%
Downloads: 0.1%
Average: 0.3%
Docker downloads count: 0.3%
Forks count: 0.6%
Stargazers count: 0.8%
Maintainers (3)
jni jarrodmillman sjvdwalt
Last synced: 6 months ago
conda-forge.org: scikit-image

scikit-image is a collection of algorithms for image processing. It is available free of charge and free of restriction. We pride ourselves on high-quality, peer-reviewed code, written by an active community of volunteers.

  • Versions: 20
  • Dependent Packages: 274
  • Dependent Repositories: 1,441
Rankings
Dependent packages count: 0.2%
Average: 0.3%
Dependent repos count: 0.4%
Last synced: 6 months ago
pypi.org: skimage

Dummy package that points to scikit-image

  • Versions: 1
  • Dependent Packages: 31
  • Dependent Repositories: 617
  • Downloads: 28,599 Last month
  • Docker Downloads: 32
Rankings
Forks count: 0.3%
Stargazers count: 0.4%
Dependent packages count: 0.5%
Dependent repos count: 0.6%
Average: 1.1%
Downloads: 1.7%
Docker downloads count: 3.0%
Maintainers (2)
jni sjvdwalt
Last synced: 6 months ago
pypi.org: scikit-image-arm64

Image processing in Python

  • Versions: 1
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Forks count: 0.3%
Stargazers count: 0.4%
Dependent packages count: 4.8%
Average: 5.1%
Dependent repos count: 6.3%
Downloads: 13.4%
Maintainers (1)
aditya_j
Last synced: about 1 year ago
anaconda.org: scikit-image

scikit-image is a collection of algorithms for image processing. It is available free of charge and free of restriction. We pride ourselves on high-quality, peer-reviewed code, written by an active community of volunteers.

  • Homepage: https://scikit-image.org
  • License: BSD-3-Clause AND MIT AND BSD-2-Clause
  • Latest release: 0.25.2
    published 8 months ago
  • Versions: 20
  • Dependent Packages: 10
  • Dependent Repositories: 1,441
Rankings
Dependent repos count: 2.8%
Dependent packages count: 5.1%
Average: 6.5%
Forks count: 7.1%
Stargazers count: 11.2%
Last synced: 6 months ago
pypi.org: skimage2

scikit-image 2.0 placeholder

  • Versions: 1
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 162 Last month
Rankings
Forks count: 0.4%
Stargazers count: 0.6%
Dependent packages count: 9.9%
Average: 19.1%
Dependent repos count: 65.6%
Maintainers (1)
sjvdwalt
Last synced: 6 months ago
pypi.org: scikit-image-augument-img

Image processing in Python

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 23 Last month
Rankings
Dependent packages count: 10.1%
Dependent repos count: 21.6%
Forks count: 22.7%
Average: 23.3%
Downloads: 23.5%
Stargazers count: 38.8%
Maintainers (1)
Yashawant_Parab
Last synced: 6 months ago

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