Data

Tools

Indexes

Applications

Experiments

Open Source Science

bebi103

Utilities for BE/Bi 103

https://github.com/justinbois/bebi103

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    7 of 14 committers (50.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (1.9%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Utilities for BE/Bi 103

Basic Info
  • Host: GitHub
  • Owner: justinbois
  • License: bsd-3-clause
  • Language: Python
  • Default Branch: master
  • Size: 364 MB
Statistics
  • Stars: 16
  • Watchers: 2
  • Forks: 15
  • Open Issues: 6
  • Releases: 13
Created over 10 years ago · Last pushed over 1 year ago
Metadata Files
Readme License Codemeta

README.md

bebi103

DOI

Utilities Caltech BE/Bi 103 ab: Data Analysis in the Biological Sciences

Please see the documentation.

Owner

  • Name: Justin Bois
  • Login: justinbois
  • Kind: user
  • Company: Caltech

CodeMeta (codemeta.json) 

{
  "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
  "@type": "SoftwareSourceCode",
  "description": "Python utilities for the Caltech course BE/Bi 103: Data Analysis in the Biological Sciences.",
  "name": "bebi103",
  "codeRepository": "https://github.com/justinbois/bebi103",
  "issueTracker": "https://github.com/justinbois/bebi103/issues",
  "license": "https://spdx.org/licenses/BSD-3-Clause",
  "version": "0.1.28",
  "author": [
    {
      "@type": "Person",
      "givenName": "Justin",
      "familyName": "Bois",
      "affiliation": "Caltech",
      "email": "bois@caltech.edu",
      "@id": "https://orcid.org/0000-0001-7137-8746"
    }
  ],
  "developmentStatus": "active",
  "downloadUrl": "https://github.com/justinbois/bebi103/releases",
  "keywords": [
    "GitHub",
    "Python",
    "Instruction",
    "Biology"
  ],
  "maintainer": "https://orcid.org/0000-0001-7137-8746",
  "programmingLanguage": "Python"
}

GitHub Events

Total
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Watch event: 1
  • Issue comment event: 3
  • Push event: 3
Last Year
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Watch event: 1
  • Issue comment event: 3
  • Push event: 3

Committers

Last synced: about 3 years ago

All Time
  • Total Commits: 1,435
  • Total Committers: 14
  • Avg Commits per committer: 102.5
  • Development Distribution Score (DDS): 0.173
Top Committers
Name Email Commits
Justin Bois b****s@c****u 1,187
Heidi Klumpe h****e@c****u 84
Justin Bois j****s@g****m 53
Porfirio Quintero p****c@g****m 48
Griffin Chure g****e@c****u 29
Shyam Saladi s****i@c****u 15
mrazomej m****m@g****m 11
EC2 Default User e****r@i****l 2
Muir Morrison m****r@c****u 1
Manuel Razo Mejía m****j@M****l 1
Muir Morrison m****r@m****l 1
Tom Morrell t****l@c****u 1
justinbois b****s@d****u 1
Enrico Borba e****b@g****m 1
Committer Domains (Top 20 + Academic)
caltech.edu: 6 dhcp-2-182.caltech.edu: 1 ip-172-31-80-219.ec2.internal: 1

Issues and Pull Requests

Last synced: almost 2 years ago

All Time
  • Total issues: 22
  • Total pull requests: 11
  • Average time to close issues: 4 months
  • Average time to close pull requests: 20 days
  • Total issue authors: 10
  • Total pull request authors: 6
  • Average comments per issue: 1.09
  • Average comments per pull request: 0.45
  • Merged pull requests: 9
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 2
  • Pull requests: 0
  • Average time to close issues: 14 days
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 1.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • justinbois (7)
  • tomroesch (5)
  • mrazomej (2)
  • muirjm (2)
  • smsaladi (1)
  • julianmwagner (1)
  • ltsypin (1)
  • abdullahshafiq-bio (1)
  • rlazarovits (1)
  • ajaceves (1)
Pull Request Authors
  • smsaladi (6)
  • enricozb (1)
  • muirjm (1)
  • tmorrell (1)
  • tomroesch (1)
  • mrazomej (1)
Top Labels
Issue Labels
bug (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 721 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 4
  • Total versions: 82
  • Total maintainers: 1
pypi.org: bebi103

Python utilities for the Caltech course BE/Bi 103: Data Analysis in the Biological Sciences.

  • Versions: 82
  • Dependent Packages: 0
  • Dependent Repositories: 4
  • Downloads: 721 Last month
Rankings
Dependent repos count: 7.5%
Downloads: 9.2%
Forks count: 9.3%
Dependent packages count: 10.0%
Average: 10.2%
Stargazers count: 15.2%
Maintainers (1)
justinbois
Last synced: 10 months ago

Dependencies

requirements.txt pypi
  • arviz >=0.11.4
  • bokeh *
  • cmdstanpy >=0.9.68
  • colorcet *
  • holoviews *
  • matplotlib *
  • numba *
  • numpy *
  • pandas *
  • scipy *
  • tqdm *
  • xarray *
setup.py pypi
  • x.strip *