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repeasyy

Nextflow pipeline wrapping Repeat Modeler & Masker, TE Trimmer, and MCHelper

https://github.com/emilytrybulec/repeasyy

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (0.2%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Nextflow pipeline wrapping Repeat Modeler & Masker, TE Trimmer, and MCHelper

Basic Info
  • Host: GitHub
  • Owner: emilytrybulec
  • License: mit
  • Language: Python
  • Default Branch: main
  • Homepage:
  • Size: 40.7 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 1 year ago · Last pushed over 1 year ago
Metadata Files
Readme License Citation

Owner

  • Login: emilytrybulec
  • Kind: user

GitHub Events

Total
  • Push event: 17
Last Year
  • Push event: 17

Dependencies

modules/nf-core/fastqc/meta.yml cpan
modules/nf-core/repeatmodeler/builddatabase/meta.yml cpan
modules/nf-core/repeatmodeler/repeatmodeler/meta.yml cpan
subworkflows/nf-core/utils_nextflow_pipeline/meta.yml cpan
subworkflows/nf-core/utils_nfcore_pipeline/meta.yml cpan
subworkflows/nf-core/utils_nfvalidation_plugin/meta.yml cpan
modules/nf-core/fastqc/environment.yml conda
  • fastqc 0.12.1.*
modules/nf-core/repeatmodeler/builddatabase/environment.yml conda
  • repeatmodeler 2.0.5.*
modules/nf-core/repeatmodeler/repeatmodeler/environment.yml conda
  • repeatmodeler 2.0.5.*