trellis

Trellis visualization using Python, matplotlib, pandas, and scipy

https://github.com/jspaaks/trellis

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (5.7%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Trellis visualization using Python, matplotlib, pandas, and scipy

Basic Info
  • Host: GitHub
  • Owner: jspaaks
  • License: apache-2.0
  • Language: Python
  • Default Branch: master
  • Size: 2.6 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created almost 9 years ago · Last pushed about 8 years ago
Metadata Files
Readme License Citation Codemeta

README.md

system dependencies

bash sudo apt install python3 sudo apt install python3-dev sudo apt install python3-tk

pip dependencies

bash pip install -r requirements.txt

example output

sample of the data:

[{ "block_size_x": 16, "block_size_y": 1, "tile_size_x": 1, "tile_size_y": 1, "num_streams": 1, "time": 20.404076766967773 }, { "block_size_x": 16, "block_size_y": 1, "tile_size_x": 1, "tile_size_y": 1, "num_streams": 2, "time": 15.670905494689942 }, { "block_size_x": 16, "block_size_y": 1, "tile_size_x": 1, "tile_size_y": 1, "num_streams": 4, "time": 13.029843139648438 }, { "block_size_x": 16, "block_size_y": 1, "tile_size_x": 1, "tile_size_y": 1, "num_streams": 8, "time": 11.713497543334961 }, ... ]

Default visualization with nearest-neighbor interpolation as background to the matrix of scatter: example-output-2.png

As previous, not showing the nearest-neighbor interpolation: example-output-3.png

As previous, but with more efficient use of figure space: example-output-4.png

As previous, with manually set color axis limits: example-output-5.png

As previous, with different matplotlib colormap (PRGn) example-output-6.png

As previous, with different matplotlib colormap (hsv) example-output-7.png

Owner

  • Name: Jurriaan H. Spaaks
  • Login: jspaaks
  • Kind: user
  • Location: West Virginia, USA
  • Company: #OpenToWork

Citation (CITATION.cff)

# YAML 1.2
--- 
authors: 
  - 
    affiliation: "Netherlands eScience Center"
    family-names: Kuppevelt
    given-names: Dafne
    name-particle: van
  - 
    affiliation: "Netherlands eScience Center"
    family-names: Meijer
    given-names: Christiaan
  - 
    affiliation: "Netherlands eScience Center"
    family-names: Hees
    given-names: Vincent
    name-particle: van
  - 
    affiliation: "Netherlands eScience Center"
    family-names: Kuzak
    given-names: Mateusz
    orcid: "https://orcid.org/0000-0003-0087-6021"
cff-version: "1.0.3"
commit: 95c5a7f76525655562baeca0af8d334d1796bf57
date-released: 2017-04-06
doi: 10.5281/zenodo.495345
keywords: 
  - "machine learning"
  - "deep learning"
  - "time series"
  - "automatic classification"
license: Apache-2.0
message: "If you use this software, please cite it using these metadata."
repository-code: "https://github.com/NLeSC/mcfly"
title: mcfly
version: "1.0.1"

CodeMeta (codemeta.json)

{
  "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
  "@type": "SoftwareSourceCode",
  "codeRepository": "https://github.com/NLeSC/boatswain",
  "datePublished": "2018-01-16",
  "author": [
    {
      "@type": "Person",
      "givenName": "Berend",
      "familyName": "Weel",
      "affiliation": {
        "@type": "Organization",
        "legalName": "Netherlands eScience Center"
      }
    },
    {
      "@type": "Person",
      "additionalName": "H.",
      "givenName": "Jurriaan",
      "familyName": "Spaaks",
      "affiliation": {
        "@type": "Organization",
        "legalName": "Netherlands eScience Center"
      }
    }
  ],
  "keywords": [
    "docker",
    "docker-compose",
    "containers"
  ],
  "license": "http://www.apache.org/licenses/LICENSE-2.0",
  "version": "1.0.2",
  "identifier": "https://doi.org/10.5281/zenodo.1149011",
  "name": "boatswain"
}

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  • jspaaks (1)
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