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Open Source Science

data-collections-explorer

An information system focused on the engineering sciences

https://github.com/kit-data-manager/data-collections-explorer

Science Score: 62.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    2 of 2 committers (100.0%) from academic institutions
  • ✓
    Institutional organization owner
    Organization kit-data-manager has institutional domain (www.scc.kit.edu)
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (13.9%) to scientific vocabulary

Keywords

fullstack
Last synced: 6 months ago · JSON representation ·

Repository

An information system focused on the engineering sciences

Basic Info
Statistics
  • Stars: 2
  • Watchers: 2
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Topics
fullstack
Created over 3 years ago · Last pushed 8 months ago
Metadata Files
Readme License Citation Codemeta

README.md

Data Collections Explorer

Easy findability and accessibility are important for the efficient re-use of research data. The Data Collections Explorer is an information system focussed on the engineering sciences. We want to help your search for subject specific repositories, archives, databases, and individually published datasets by answering these questions: - Are there datasets available to support my research questions? - Are there benchmarks available to check my results? - Are datasets published Open Access? - Where to publish my research datasets? - Are there size limitations for datasets? - Are there publication costs?

Features

  • Filtering for type of resource, subject area, Open Access
  • Full-text search of the entries
  • Constantly updated based on community feedback

Getting Started

For local development, you need RStudio with the following packages installed: - rmarkdown - flexdashboard - DT - readr

These can be installed from within R as follows: install.packages(c("rmarkdown", "flexdashboard", "DT", "readr"))

Docker is required If you want to serve a local instance of the Data Collections Explorer. Run the following commands to set up the container: ```

This builds the container and installs the required packages

docker build -t nfdi4ing-data-collections-explorer:v1 - < Dockerfile

Start the container

docker compose up `` Once the container is up and running, it can be accessed atlocalhost:3838`.

The R Markdown document (index.Rmd) and the CSV table to be served are located in the application directory outside the Docker container. When the Docker container is run for the first time, a directory shiny-logs is created on the same level as the application directory.

Contributions

Please make a pull request (or open an issue) if you miss a dataset, repository, database, or archive. Please provide the following information: - Host or hosting institution(s) - Name of the dataset or service - Subject Area(s) - Open Access (yes|no|partially) - API (yes|no) - Publication cost - Dataset size limits - URL - (Optional) Comment

Thank you!

Further Information

re3data provides an overview of quality controlled repositories.

Acknowledgements

This work is being supported by NFDI4ING (DFG project number 442146713).

Owner

  • Name: KIT Data Manager
  • Login: kit-data-manager
  • Kind: organization
  • Email: webmaster@datamanger.kit.edu
  • Location: Karlsruhe, Germany

Generic software and recommendations for FAIR research data management by DEM.

Citation (CITATION.cff) 

cff-version: 1.2.0
title: Data Collections Explorer
message: >-
  If you use this software, please cite it using the
  metadata from this file.
type: software
authors:
  - given-names: Philipp
    family-names: Ost
    email: philipp.ost@kit.edu
    affiliation: Karlsruhe Institute of Technology
    orcid: 'https://orcid.org/0000-0002-7198-0566'
repository-code: >-
  https://github.com/kit-data-manager/Data-Collections-Explorer
url: 'https://data-collections.nfdi4ing.de'
license: Apache-2.0

CodeMeta (codemeta.json) 

{
  "@context": "https://w3id.org/codemeta/3.0",
  "type": "SoftwareSourceCode",
  "applicationCategory": "Engineering",
  "codeRepository": "https://github.com/kit-data-manager/Data-Collections-Explorer",
  "dateCreated": "2022-01-25",
  "datePublished": "2022-10-07",
  "description": "The NFDI4Ing Data Collections Explorer is an easy-to-use information system for the engineering sciences.",
  "funder": {
    "type": "Organization",
    "name": "NFDI4Ing"
  },
  "keywords": [
    "FAIR",
    "NFDI",
    "NFDI4Ing"
  ],
  "license": "https://spdx.org/licenses/Apache-2.0",
  "name": "Data Collections Explorer",
  "programmingLanguage": "R",
  "relatedLink": "https://data-collections.nfdi4ing.de",
  "softwareRequirements": "Docker, RStudio, rmarkdown, flexdashboard, DT, readr",
  "funding": "DFG project number 442146713",
  "issueTracker": "https://github.com/kit-data-manager/Data-Collections-Explorer/issues",
  "referencePublication": "https://doi.org/10.52825/cordi.v1i.405"
}

GitHub Events

Total
  • Watch event: 2
  • Push event: 5
  • Pull request event: 13
Last Year
  • Watch event: 2
  • Push event: 5
  • Pull request event: 13

Committers

Last synced: 10 months ago

All Time
  • Total Commits: 143
  • Total Committers: 2
  • Avg Commits per committer: 71.5
  • Development Distribution Score (DDS): 0.21
Past Year
  • Commits: 25
  • Committers: 2
  • Avg Commits per committer: 12.5
  • Development Distribution Score (DDS): 0.28
Top Committers
Name Email Commits
Philipp-Joachim Ost p****t@k****u 113
Philipp Ost p****t@k****u 30
Committer Domains (Top 20 + Academic)
kit.edu: 2

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 0
  • Total pull requests: 43
  • Average time to close issues: N/A
  • Average time to close pull requests: about 16 hours
  • Total issue authors: 0
  • Total pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.05
  • Merged pull requests: 42
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 10
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 hours
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • pjoKIT (57)
  • petarhristov94 (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

Dockerfile docker
  • rocker/shiny 4.1.2 build
docker-compose.yml docker
  • nfdi4ing-data-collections-explorer v1