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named-entity-recognition

https://github.com/semanticclimate/named-entity-recognition

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 5 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
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    Institutional organization owner
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (10.0%) to scientific vocabulary
Last synced: 7 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: semanticClimate
  • License: apache-2.0
  • Default Branch: main
  • Size: 5.86 KB
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Created 8 months ago · Last pushed 8 months ago
Metadata Files
Readme License Citation

README.md

Named Entity Recognition (NER) from Scholarly Literatures

Open in Colab

DOI Zenodo badge:

DOI

Citation:

Jawed, M., Priti, Mandeep, S, A., Barbhuiya, S., Kumari, R., Simon, W., Yadav, G., & Murray-Rust, P. (2025). Named Entity Recognition (NER) from Scholarly Literatures. Zenodo. https://doi.org/10.5281/zenodo.16559426

Description:

The Named Entity Recognition (NER) pipeline is a modular, domain-sensitive framework for extracting key entities from scientific literatures, technical documents, or any scholarly literature. It focuses on extracting countries, species, diseases, and genes, with high precision through the combination of domain-specific models and curated validation strategies. The jupyter notebook presented here has been designed for both research and applied analysis. The important features are: - Modular – separate logic for each entity type - Scalable – capable of processing large corpora - Extendable – easily customized for new entity types or domains

The output of the notebook is the list of entities (countries, species, disease, gene etc) validated from different open access databases.

Notebook URL

Reviewers & review process: <Add reviewers and review process link>

Software citation information: CITATION.cff

License: Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ | License information: LICENSE

Owner

  • Name: semanticClimate
  • Login: semanticClimate
  • Kind: organization

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Jawed"
  given-names: "Moobashara"
  orcid: "https://orcid.org/0009-0009-7488-4834"
- family-names: "Priti"
  given-names: "Priti"
  orcid: "https://orcid.org/0009-0006-3380-2458"
- family-names: "Mandeep"
  given-names: "Mandeep"
  orcid: "https://orcid.org/0009-0007-4715-0195"
- family-names: "S"
  given-names: "Anudev"
  orcid: "https://orcid.org/0009-0006-5487-4741"
- family-names: "Barbhuiya"
  given-names: "Shabnam"
  orcid: "https://orcid.org/0009-0004-0729-7385"
- family-names: "Kumari"
  given-names: "Renu"
  orcid: "https://orcid.org/0000-0002-9451-7814"
- family-names: "Simon"
  given-names: "Worthington"
  orcid: "https://orcid.org/0000-0002-8579-9717"
- family-names: "Yadav"
  given-names: "Gitanjali"
  orcid: "https://orcid.org/0000-0001-6591-9964"
- family-names: "Murray-Rust"
  given-names: "Peter"
  orcid: "https://orcid.org/0000-0003-3386-3972"  
title: "Named Entity Recognition (NER) from Scholarly Literatures"
version: 0.0.1
doi: 10.5281/zenodo.
date-released: 2025-07-29
url: "https://github.com/semanticClimate/"

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