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modloop

Web server for automated modeling of loops in protein structures

https://github.com/salilab/modloop

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: ncbi.nlm.nih.gov
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.9%) to scientific vocabulary

Keywords

loop-prediction protein-structure web-service
Last synced: 6 months ago · JSON representation ·

Repository

Web server for automated modeling of loops in protein structures

Basic Info
Statistics
  • Stars: 6
  • Watchers: 3
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Topics
loop-prediction protein-structure web-service
Created about 11 years ago · Last pushed 9 months ago
Metadata Files
Readme License Citation

README.md

Build Status codecov Code Climate

This is the source code for ModLoop, a web service for the automated modeling of loops in protein structures. It uses the Sali lab web framework.

See A. Fiser, and A. Sali, Bioinformatics, (2003) 19, 2500-01 for details.

Owner

  • Name: Sali Lab
  • Login: salilab
  • Kind: organization
  • Location: San Francisco, CA

Laboratory of Andrej Sali at the University of California San Francisco

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Fiser"
  given-names: "András"
- family-names: "Sali"
  given-names: "Andrej"
title: "ModLoop"
url: "https://github.com/salilab/modloop"
preferred-citation:
  type: article
  authors:
  - family-names: "Fiser"
    given-names: "András"
  - family-names: "Sali"
    given-names: "Andrej"
  doi: "10.1093/bioinformatics/btg362"
  journal: "Bioinformatics"
  month: 12
  start: 2500
  end: 2501
  title: "ModLoop: automated modeling of loops in protein structures"
  volume: 19
  issue: 18
  year: 2003

GitHub Events

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  • Watch event: 1
  • Push event: 3
Last Year
  • Watch event: 1
  • Push event: 3

Dependencies

.github/workflows/build.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • codecov/codecov-action v1 composite