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fmripost-rapidtide

A BIDS App for running rapidtide on a preprocessed fMRI dataset.

https://github.com/nipreps/fmripost-rapidtide

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.1%) to scientific vocabulary

Keywords

fmri fmri-preprocessing fmriprep
Last synced: 6 months ago · JSON representation

Repository

A BIDS App for running rapidtide on a preprocessed fMRI dataset.

Basic Info
Statistics
  • Stars: 4
  • Watchers: 6
  • Forks: 1
  • Open Issues: 13
  • Releases: 0
Topics
fmri fmri-preprocessing fmriprep
Created over 1 year ago · Last pushed 8 months ago
Metadata Files
Readme Changelog Contributing License Code of conduct Zenodo Notice

README.rst 

#########################################################
**fMRIPost-rapidtide** : A BIDS App for running rapidtide on a preprocessed fMRI dataset.
#########################################################

.. image:: https://img.shields.io/badge/Source%20Code-nipreps%2Ffmripost--rapidtide-purple
   :target: https://github.com/nipreps/fmripost-rapidtide/
   :alt: GitHub Repository

.. image:: https://readthedocs.org/projects/fmripost-rapidtide/badge/?version=latest
   :target: https://fmripost-rapidtide.readthedocs.io/en/latest/
   :alt: Documentation

.. image:: https://img.shields.io/badge/docker-nipreps/fmripost--rapidtide-brightgreen.svg?logo=docker&style=flat
   :target: https://hub.docker.com/r/nipreps/fmripost-rapidtide/tags
   :alt: Docker

.. image:: https://codecov.io/gh/nipreps/fmripost-rapidtide/branch/main/graph/badge.svg
   :target: https://app.codecov.io/gh/nipreps/fmripost-rapidtide
   :alt: Codecov

.. image:: https://img.shields.io/github/license/nipreps/fmripost-rapidtide
   :target: https://opensource.org/license/apache-2-0
   :alt: License

.. image:: https://github.com/nipreps/fmripost-rapidtide/actions/workflows/test.yml/badge.svg
   :target: https://github.com/nipreps/fmripost-rapidtide/actions/workflows/test.yml
   :alt: Test Status

Owner

  • Name: NeuroImaging PREProcessing toolS
  • Login: nipreps
  • Kind: organization
  • Email: nipreps@gmail.com

GitHub Events

Total
  • Issues event: 13
  • Watch event: 3
  • Delete event: 20
  • Member event: 2
  • Issue comment event: 17
  • Push event: 126
  • Pull request review event: 3
  • Pull request event: 50
  • Fork event: 1
  • Create event: 26
Last Year
  • Issues event: 13
  • Watch event: 3
  • Delete event: 20
  • Member event: 2
  • Issue comment event: 17
  • Push event: 126
  • Pull request review event: 3
  • Pull request event: 50
  • Fork event: 1
  • Create event: 26

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 19
  • Total pull requests: 30
  • Average time to close issues: 28 days
  • Average time to close pull requests: 14 days
  • Total issue authors: 2
  • Total pull request authors: 5
  • Average comments per issue: 2.63
  • Average comments per pull request: 1.53
  • Merged pull requests: 22
  • Bot issues: 0
  • Bot pull requests: 12
Past Year
  • Issues: 16
  • Pull requests: 28
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 15 days
  • Issue authors: 2
  • Pull request authors: 5
  • Average comments per issue: 2.38
  • Average comments per pull request: 1.64
  • Merged pull requests: 20
  • Bot issues: 0
  • Bot pull requests: 12
View more stats
Top Authors
Issue Authors
  • tsalo (19)
  • johnjohnm (1)
Pull Request Authors
  • dependabot[bot] (16)
  • tsalo (16)
  • mattcieslak (2)
  • effigies (2)
  • smeisler (2)
Top Labels
Issue Labels
enhancement (10) bug (3)
Pull Request Labels
dependencies (16) github_actions (16) bug (1)

Dependencies

Dockerfile docker
  • ${BASE_IMAGE} latest build
  • downloader latest build
  • python slim build
pyproject.toml pypi
  • fmriprep @ git+https://github.com/nipreps/fmriprep.git@master
  • nipype >= 1.8.5
  • nireports @ git+https://github.com/nipreps/nireports.git@main
  • niworkflows @ git+https://github.com/nipreps/niworkflows.git@master
  • pybids >= 0.15.6
  • rapidtide == 2.9.5.2
  • sdcflows @ git+https://github.com/nipreps/sdcflows.git@master
  • smriprep @ git+https://github.com/nipreps/smriprep.git@master
  • typer *
.github/workflows/contrib.yml actions
  • actions/checkout v4 composite
  • codespell-project/actions-codespell v2 composite
.github/workflows/docker.yml actions
  • actions/checkout v4 composite
  • docker/build-push-action v6.7.0 composite
  • docker/login-action v3.3.0 composite
  • docker/metadata-action v5.5.1 composite
  • docker/setup-buildx-action v3.6.1 composite
.github/workflows/test.yml actions
  • actions/checkout v4 composite
  • actions/setup-python v5 composite
  • codecov/codecov-action v4 composite