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mcmlpy

Python routines to parse MCML output files

https://github.com/scottprahl/mcmlpy

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (7.2%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Python routines to parse MCML output files

Basic Info
  • Host: GitHub
  • Owner: scottprahl
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 2.59 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 1 year ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog License Citation

README.rst 

.. |pypi| image:: https://img.shields.io/pypi/v/mcmlpy?color=68CA66
   :target: https://pypi.org/project/mcmlpy/
   :alt: pypi

.. |github| image:: https://img.shields.io/github/v/tag/scottprahl/mcmlpy?label=github&color=68CA66
   :target: https://github.com/scottprahl/mcmlpy
   :alt: github

.. |conda| image:: https://img.shields.io/conda/vn/conda-forge/mcmlpy?label=conda&color=68CA66
   :target: https://github.com/conda-forge/mcmlpy-feedstock
   :alt: conda

.. |doi| image:: https://zenodo.org/badge/116033943.svg
   :target: https://zenodo.org/badge/latestdoi/116033943
   :alt: doi  

.. |license| image:: https://img.shields.io/github/license/scottprahl/mcmlpy?color=68CA66
   :target: https://github.com/scottprahl/mcmlpy/blob/main/LICENSE.txt
   :alt: License

.. |test| image:: https://github.com/scottprahl/mcmlpy/actions/workflows/test.yaml/badge.svg
   :target: https://github.com/scottprahl/mcmlpy/actions/workflows/test.yaml
   :alt: Testing

.. |docs| image:: https://readthedocs.org/projects/mcmlpy/badge?color=68CA66
   :target: https://mcmlpy.readthedocs.io
   :alt: Docs

.. |downloads| image:: https://img.shields.io/pypi/dm/mcmlpy?color=68CA66
   :target: https://pypi.org/project/mcmlpy/
   :alt: Downloads


mcmlpy
======

by Scott Prahl

|pypi| |github| |conda| |doi|

|license| |test| |docs| |downloads|

A python interface for MCML  output files.

Installation
------------

Use ``pip``::

    pip install mcmlpy

or use immediately by clicking the Google Colaboratory button below

.. image:: https://colab.research.google.com/assets/colab-badge.svg
  :target: https://colab.research.google.com/github/scottprahl/mcmlpy/blob/main
  :alt: Colab

License
-------
``mcmlpy`` is licensed under the terms of the MIT license.

Owner

  • Name: Scott Prahl
  • Login: scottprahl
  • Kind: user
  • Location: Portland, Oregon
  • Company: Oregon Institute of Technology

Citation (CITATION.cff) 

authors:
- family-names: Prahl
  given-names: Scott
  orcid: https://orcid.org/0000-0003-1468-6851
cff-version: 1.2.0
date-released: '2023-09-22'
doi: 10.5281/zenodo.8370822
message: If you use this software, please cite it as below.
title: 'mcmlpy: a python class to interact with MCML and MCsub output'
url: https://zenodo.org/badge/latestdoi/116033943
version: 0.5.0

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Dependencies

.github/workflows/citation.yaml actions
  • actions/checkout v4 composite
  • actions/setup-python v5 composite
.github/workflows/pypi.yaml actions
  • actions/checkout v4 composite
  • actions/setup-python v5 composite
  • pypa/gh-action-pypi-publish release/v1 composite
.github/workflows/test.yaml actions
  • actions/checkout v4 composite
  • actions/setup-python v5 composite
docs/requirements.txt pypi
  • matplotlib *
  • mcmlpy *
  • nbsphinx *
  • numpy *
  • sphinx-automodapi *
  • sphinx-rtd-theme ==1.3.0
pyproject.toml pypi
requirements.txt pypi
  • matplotlib *
  • numpy *
  • pytest *
setup.py pypi