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bace-legacy-effects

Analysis of soil legacy effect experiment at Boston Area Climate Experiment (BACE)

https://github.com/aariq/bace-legacy-effects

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 6 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
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    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (9.1%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Analysis of soil legacy effect experiment at Boston Area Climate Experiment (BACE)

Basic Info
  • Host: GitHub
  • Owner: Aariq
  • License: mit
  • Language: R
  • Default Branch: master
  • Size: 18.7 MB
Statistics
  • Stars: 1
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 3
Created almost 5 years ago · Last pushed almost 3 years ago
Metadata Files
Readme License Citation

README.md

BACE-legacy-effects

DOI code

Data analysis for a project at the Boston Area Climate Experiment (BACE) looking at legacy effects of precipitation treatments on crop growth and nutrients.

When using this code or data, please cite the archive of this repository as well as the associated publication:

Scott, E. R., Jackson, E. D., Casolaro, C., Nebeker, R. S., Dukes, J. S., Griffin, T., & Orians, C. M. (2023). Code and Data from: Current and Legacy Effects of Precipitation Treatments on Growth and Nutrition in Contrasting Crops (Version v1.0) [Computer software]. https://doi.org/10.5281/zenodo.6478160

Jackson, E.D., Casolaro, C., Nebeker, R.S., Scott, E.R., Dukes, J.S., Griffin, T.S., Orians, C.M., 2023. Current and legacy effects of precipitation treatments on growth and nutrition in contrasting crops. Agriculture, Ecosystems & Environment 352, 108513. https://doi.org/10.1016/j.agee.2023.108513

Reproducibility

This research compendium makes use of the targets package for a reproducible workflow and the renv package for managing R package dependencies.

Steps to reproduce this analysis:

  1. Clone this repository
  2. Open it in RStudio
  3. Install dependencies by running renv::restore() (NOTE: you may need to install gfortran if you don't have it in order to compile some packages from source. Install from here: https://cran.r-project.org/bin/macosx/tools/)
  4. Run analysis pipeline with targets::tar_make()

To reproduce the analysis, fork this repository, clone it, open it in RStudio, install the targets package as well as all packages in packages.R. Then run targets::tar_make().

Owner

  • Name: Eric R. Scott
  • Login: Aariq
  • Kind: user
  • Company: University of Arizona, @cct-datascience

Scientific Programmer & Educator at University of Arizona

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this code or data, please cite the data archive and the published paper"
title: "Code and Data from: Current and Legacy Effects of Precipitation Treatments on Growth and Nutrition in Contrasting Crops"
type: software
version: v1.0
authors:
  - family-names: "Scott"
    given-names: "Eric R."
    orcid: "https://orcid.org/0000-0002-7430-7879"
  - family-names: "Jackson"
    given-names: "Erin Donley"
  - family-names: "Casolaro"
    given-names: "Christian"
  - family-names: "Nebeker"
    given-names: "Ryan S."
  - family-names: "Dukes"
    given-names: "Jeffrey S."
  - family-names: "Griffin"
    given-names: "Timothy"
  - family-names: "Orians"
    given-names: "Colin M."
doi: 10.5281/zenodo.6478160
url: "https://github.com/Aariq/BACE-legacy-effects"
date-released: 2023-02-17
preferred-citation:
  type: article
  title: "Current and legacy effects of precipitation treatments on growth and nutrition in contrasting crops"
  authors:
    - family-names: "Jackson"
      given-names: "Erin Donley"
    - family-names: "Casolaro"
      given-names: "Christian"
    - family-names: "Nebeker"
      given-names: "Ryan S."
    - family-names: "Scott"
      given-names: "Eric R."
      orcid: "https://orcid.org/0000-0002-7430-7879"
    - family-names: "Dukes"
      given-names: "Jeffrey S."
    - family-names: "Griffin"
      given-names: "Timothy"
    - family-names: "Orians"
      given-names: "Colin M."
  journal: "Agriculture, Ecosystems & Environment"
  volume: 352
  year: 2023
  doi: 10.1016/j.agee.2023.108513

GitHub Events

Total
  • Issues event: 2
Last Year
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Last synced: 12 months ago

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  • Total issues: 39
  • Total pull requests: 13
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 36 minutes
  • Total issue authors: 2
  • Total pull request authors: 1
  • Average comments per issue: 0.23
  • Average comments per pull request: 0.0
  • Merged pull requests: 13
  • Bot issues: 1
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Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: 3 minutes
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 1
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