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historicaldisturbances

https://github.com/dominiquecaron/historicaldisturbances

Science Score: 44.0%

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    Low similarity (7.8%) to scientific vocabulary
Last synced: 9 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: DominiqueCaron
  • License: other
  • Language: HTML
  • Default Branch: main
  • Size: 423 KB
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  • Stars: 0
  • Watchers: 0
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  • Open Issues: 0
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Created 10 months ago · Last pushed 10 months ago
Metadata Files
Readme Changelog License Citation

README.md

title: "historicalDisturbances Manual" subtitle: "v.0.0.0.9000" date: "Last updated: 2025-08-05" output: bookdown::htmldocument2: toc: true tocfloat: true theme: sandstone numbersections: false dfprint: paged keepmd: yes editoroptions: chunkoutputtype: console bibliography: citations/references_historicalDisturbances.bib link-citations: true

alwaysallowhtml: true

historicalDisturbances Module

(ref:historicalDisturbances) historicalDisturbances

made-with-Markdown

Authors:

Dominique, Caron, dominique.caron@nrcan-rncan.gc.ca, aut, cre <!-- ideally separate authors with new lines, '\n' not working -->

Module Overview

Module summary

The module download disturbance data from various sources and prepare them to be used in other modules. The following disturbance product available are the following:

Table \@ref(tab:data-historicalDisturbances) shows the full list of module inputs.

(\#tab:data-historicalDisturbances)(\#tab:data-historicalDisturbances)Available disturbance products
disturbanceSource disturbanceTypes disturbanceYears url citation
CanLaD wildfire 1985:2024 https://open.canada.ca/data/en/dataset/902801fd-4d9d-4df4-9e95-319e429545cc Perbet, P., Guindon, L., Correia D.L.P., P. Villemaire, O., Reisi Gahrouei R. St-Amant, Canada Landsat Disturbance with pest (CanLaD): a Canada-wide Landsat-based 30-m resolution product of fire, harvest and pest outbreak detection and attribution since 1987.
CanLaD harvesting 1985:2024 https://open.canada.ca/data/en/dataset/902801fd-4d9d-4df4-9e95-319e429545cc Perbet, P., Guindon, L., Correia D.L.P., P. Villemaire, O., Reisi Gahrouei R. St-Amant, Canada Landsat Disturbance with pest (CanLaD): a Canada-wide Landsat-based 30-m resolution product of fire, harvest and pest outbreak detection and attribution since 1987.
NTEMS wildfire 1985:2020 https://opendata.nfis.org/mapserver/nfis-change_eng.html Hermosilla, T., M.A. Wulder, J.C. White, N.C. Coops, G.W. Hobart, L.B. Campbell, 2016. Mass data processing of time series Landsat imagery: pixels to data products for forest monitoring. International Journal of Digital Earth 9(11), 1035-1054
NTEMS harvesting 1985:2020 https://opendata.nfis.org/mapserver/nfis-change_eng.html Hermosilla, T., M.A. Wulder, J.C. White, N.C. Coops, G.W. Hobart, L.B. Campbell, 2016. Mass data processing of time series Landsat imagery: pixels to data products for forest monitoring. International Journal of Digital Earth 9(11), 1035-1054
NBAC wildfire 1972:2024 https://cwfis.cfs.nrcan.gc.ca/datamart Canadian Forest Service. National Burned Area Composite (NBAC). Natural Resources Canada, Canadian Forest Service, Northern Forestry Centre, Edmonton, Alberta

Module inputs and parameters

Table \@ref(tab:moduleInputs-historicalDisturbances) shows the full list of module inputs.

(\#tab:moduleInputs-historicalDisturbancess)(\#tab:moduleInputs-historicalDisturbancess)List of (ref:historicalDisturbances) input objects and their description.
objectName objectClass desc sourceURL columns
disturbanceMeta data.table Table defining the disturbance event types in disturbanceRasters. Need to be provided with disturbanceRasters. NA Event ty....
disturbanceRasters list Set of spatial data sources containing locations of disturbance events for each year. List items must be named by disturbance event type ID (e.g., "1"). Within each event's list, items must be named by the 4 digit year the disturbances occured in. For example, fires for 2025 can be accessed with `disturbanceRasters[["1"]][["2025"]]`. Each disturbance item is a terra SpatRaster layer. Needs the input disturbanceMeta. NA
rasterToMatch spatRaster Raster template defining the study area. NA cells will be excluded from analysis. NA

Summary of user-visible parameters (Table \@ref(tab:moduleParams-historicalDisturbances))

(\#tab:moduleParams-historicalDisturbances)(\#tab:moduleParams-historicalDisturbances)List of (ref:historicalDisturbances) parameters and their description.
paramName paramClass default min max paramDesc
disturbanceSource character CanLaD NA NA The disturbance data source. Refer to data/availableData.csv to see which data is available.
disturbanceYears numeric NA NA NA The range of years for which disturbances are extracted. Refer to data/availableData.csv to see which data is available.
disturbanceTypes character wildfire NA NA The type of disturbance extracted. Refer to data/availableData.csv to see which data is available.
.plots character screen NA NA Used by Plots function, which can be optionally used here
.plotInitialTime numeric 0 NA NA Describes the simulation time at which the first plot event should occur.
.plotInterval numeric NA NA NA Describes the simulation time interval between plot events.
.useCache logical FALSE NA NA Should caching of events or module be used?

Module outputs

Description of the module outputs (Table \@ref(tab:moduleOutputs-historicalDisturbances)).

(\#tab:moduleOutputs-historicalDisturbances)(\#tab:moduleOutputs-historicalDisturbances)List of (ref:historicalDisturbances) outputs and their description.
objectName objectClass desc columns
disturbanceMeta data.table Table defining the disturbance event types. Event ty....
rstCurrentBurn spatRaster A binary raster with 1 values representing burned pixels.
rstCurrentHarvest spatRaster A binary raster with 1 values representing harvested pixels.

Owner

  • Name: Dominique Caron
  • Login: DominiqueCaron
  • Kind: user
  • Location: Montréal, QC
  • Company: Ph.D. McGill University

Citation (citation.bib) 

@Manual{,
  title = "historicalDisturbances",
  author = "First Middle Last",
  organization = "Organization",
  address = "Somewhere, Someplace",
  year = "2025",
  url = "",
}

GitHub Events

Total
  • Push event: 12
  • Create event: 1
Last Year
  • Push event: 12
  • Create event: 1

Issues and Pull Requests

Last synced: 10 months ago

Dependencies

.github/workflows/render-module-rmd.yaml actions
  • PredictiveEcology/actions/install-Require v0.2 composite
  • PredictiveEcology/actions/install-Rmd-pkgs v0.2 composite
  • PredictiveEcology/actions/install-SpaDES v0.2 composite
  • PredictiveEcology/actions/install-spatial-deps v0.2 composite
  • actions/checkout v4 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite