Science Score: 77.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 6 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
4 of 17 committers (23.5%) from academic institutions -
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (13.2%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
Tool for segmentation in bioimaging
Basic Info
- Host: GitHub
- Owner: 4DNucleome
- License: bsd-3-clause
- Language: Python
- Default Branch: develop
- Homepage: https://partseg.github.io/
- Size: 32.9 MB
Statistics
- Stars: 35
- Watchers: 3
- Forks: 11
- Open Issues: 22
- Releases: 87
Topics
Metadata Files
Readme.md
PartSeg
PartSeg is a GUI and a library for segmentation algorithms. PartSeg also provide napari plugins for IO and labels measurement.
This application is designed to help biologist with segmentation based on threshold and connected components.

Tutorials
- Tutorial: Chromosome 1 (as gui) link
- Data for chromosome 1 tutorial link
- Tutorial: Different neuron types (as library) link
Installation
From binaries:
With pip:
- From pypi:
pip install PartSeg[all] - From repository:
pip install git+https://github.com/4DNucleome/PartSeg.git
- From pypi:
With conda:
conda install -c conda-forge partsegmamba install -c conda-forge partseg- As mamba is faster than conda
With napari:
If you do not know how to setup python environment on your system you may use napari to run PartSeg. It is a GUI for scientific image analysis. PartSeg is also a plugin for napari so could be installed from plugin dialog. To install napari bundle please download it napari bundle and follow installation instructions.
Installation troubleshooting information could be found in wiki: wiki. If this information does not solve problem you can open issue.
Qt 6 support
PartSeg development branch support (and stable since 0.15.0) has experimental Qt6 support. Test are passing but not whole GUI code is covered by tests. Inf you Find any problem please report it.
Running
If you downloaded binaries, run the PartSeg (or PartSeg.exe for Windows) file inside the PartSeg folder
If you installed from repository or from pip, you can run it with PartSeg command or python -m PartSeg.
First option does not work on Windows.
PartSeg export few commandline options:
--no_report- disable error reporting--no_dialog- disable error reporting and error dialog. Use only when running from terminal.roi- skip launcher and start ROI analysis guimask- skip launcher and start ROI mask gui
napari plugin
PartSeg provides napari plugins for io to allow reading projects format in napari viewer.
Save Format
Saved projects are tar files compressed with gzip or bz2.
Metadata is saved in data.json file (in json format). Images/masks are saved as *.npy (numpy array format).
Interface
Launcher. Choose the program that you will launch:

Main window of Segmentation Analysis:

Main window of Segmentation Analysis with view on measurement result:

Window for creating a set of measurements:

Main window of Mask Segmentation:

Laboratory
Laboratory of Functional and Structural Genomics http://4dnucleome.cent.uw.edu.pl/
Cite as
Bokota, G., Sroka, J., Basu, S. et al. PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies. BMC Bioinformatics 22, 72 (2021). https://doi.org/10.1186/s12859-021-03984-1
Owner
- Name: 4DNucleome
- Login: 4DNucleome
- Kind: organization
- Repositories: 7
- Profile: https://github.com/4DNucleome
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: >-
PartSeg: a tool for quantitative feature extraction
from 3D microscopy images for dummies
message: Cite as
type: software
authors:
- given-names: Grzegorz
family-names: Bokota
email: g.bokota@mimuw.edu.pl
orcid: 'https://orcid.org/0000-0002-5470-1676'
- given-names: Jacek
family-names: Sroka
orcid: 'https://orcid.org/0000-0002-1714-9667'
- orcid: 'https://orcid.org/0000-0003-1780-0461'
given-names: Subhadip
family-names: Basu
- given-names: Nirmal
family-names: Das
- given-names: Paweł
family-names: Trzaskoma
orcid: 'https://orcid.org/0000-0002-5823-6572'
- given-names: Yana
family-names: Yushkevich
orcid: 'https://orcid.org/0000-0002-5475-8613'
- given-names: Agnieszka
family-names: Grabowska
orcid: 'https://orcid.org/0000-0002-8804-6817'
- given-names: Adriana
family-names: Magalska
orcid: 'https://orcid.org/0000-0002-0517-7134'
- given-names: Dariusz
family-names: Plewczyński
orcid: 'https://orcid.org/0000-0002-3840-7610'
doi: doi.org/10.1186/s12859-021-03984-1
GitHub Events
Total
- Create event: 71
- Release event: 4
- Issues event: 18
- Watch event: 7
- Delete event: 63
- Issue comment event: 406
- Push event: 225
- Pull request review comment event: 39
- Pull request review event: 106
- Pull request event: 128
- Fork event: 1
Last Year
- Create event: 71
- Release event: 4
- Issues event: 18
- Watch event: 7
- Delete event: 63
- Issue comment event: 406
- Push event: 225
- Pull request review comment event: 39
- Pull request review event: 106
- Pull request event: 128
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Grzegorz Bokota | b****b@g****m | 1,219 |
| Grzegorz Bokota | g****a@c****l | 348 |
| Grzegorz Bokota | b****a@g****m | 173 |
| pre-commit-ci[bot] | 6****] | 86 |
| dependabot[bot] | 4****] | 57 |
| Grzegorz Bokota | g****a@m****l | 10 |
| sroka | s****a@m****l | 4 |
| dependabot-preview[bot] | 2****] | 4 |
| semgrep.dev on behalf of @Czaki | s****t@r****v | 1 |
| sourcery-ai[bot] | 5****] | 1 |
| github-actions[bot] | 4****] | 1 |
| Justin Kiggins | j****s@g****m | 1 |
| Anodarai | 5****i | 1 |
| DeepSource Bot | b****t@d****o | 1 |
| Clemens Hug | c****g@h****u | 1 |
| deepsource-autofix[bot] | 6****] | 1 |
| jaimergp | j****p | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 45
- Total pull requests: 373
- Average time to close issues: 24 days
- Average time to close pull requests: 6 days
- Total issue authors: 4
- Total pull request authors: 6
- Average comments per issue: 0.16
- Average comments per pull request: 2.85
- Merged pull requests: 315
- Bot issues: 41
- Bot pull requests: 127
Past Year
- Issues: 7
- Pull requests: 56
- Average time to close issues: about 1 month
- Average time to close pull requests: 5 days
- Issue authors: 2
- Pull request authors: 4
- Average comments per issue: 0.71
- Average comments per pull request: 2.43
- Merged pull requests: 38
- Bot issues: 6
- Bot pull requests: 29
Top Authors
Issue Authors
- github-actions[bot] (45)
- Czaki (6)
- sentry-io[bot] (1)
- iyasik (1)
Pull Request Authors
- Czaki (328)
- pre-commit-ci[bot] (86)
- dependabot[bot] (45)
- github-actions[bot] (9)
- sourcery-ai[bot] (6)
- jaimergp (1)
- daviddaytw (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 4
-
Total downloads:
- pypi 912 last-month
-
Total dependent packages: 2
(may contain duplicates) -
Total dependent repositories: 1
(may contain duplicates) - Total versions: 230
- Total maintainers: 1
proxy.golang.org: github.com/4dnucleome/partseg
- Documentation: https://pkg.go.dev/github.com/4dnucleome/partseg#section-documentation
- License: bsd-3-clause
-
Latest release: v0.16.3
published 8 months ago
Rankings
proxy.golang.org: github.com/4DNucleome/PartSeg
- Documentation: https://pkg.go.dev/github.com/4DNucleome/PartSeg#section-documentation
- License: bsd-3-clause
-
Latest release: v0.16.3
published 8 months ago
Rankings
pypi.org: partseg
PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,
- Homepage: https://partseg.github.io/
- Documentation: https://partseg.readthedocs.io/en/stable/
- License: BSD-3-Clause
-
Latest release: 0.16.3
published 8 months ago
Rankings
Maintainers (1)
conda-forge.org: partseg
- Homepage: https://4dnucleome.cent.uw.edu.pl/PartSeg/
- License: BSD-3-Clause
-
Latest release: 0.14.6
published over 3 years ago
Rankings
Dependencies
- actions/download-artifact v1 composite
- actions/setup-python v1 composite
- actions/checkout v3 composite
- actions/download-artifact v3 composite
- actions/setup-python v4 composite
- aganders3/headless-gui v1 composite
- codecov/codecov-action v3 composite
- actions/checkout v3 composite
- github/codeql-action/analyze v2 composite
- github/codeql-action/autobuild v2 composite
- github/codeql-action/init v2 composite
- actions/checkout v3 composite
- returntocorp/semgrep-action v1 composite
- GabrielBB/xvfb-action v1 composite
- JasonEtco/create-an-issue v2 composite
- actions/checkout v3 composite
- actions/download-artifact v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- tlambert03/setup-qt-libs v1 composite
- GabrielBB/xvfb-action v1 composite
- JasonEtco/create-an-issue v2 composite
- actions/checkout v3 composite
- actions/download-artifact v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- tlambert03/setup-qt-libs v1 composite
- GabrielBB/xvfb-action v1 composite
- actions/checkout v3 composite
- actions/download-artifact v3 composite
- actions/upload-artifact v3 composite
- conda-incubator/setup-miniconda v2 composite
- hynek/build-and-inspect-python-package v1 composite
- tlambert03/setup-qt-libs v1 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- peter-evans/create-pull-request v4 composite
- python-3.8.8 *
- cibuildwheel *
- black * development
- build * development
- numpy >=1.16.0 development
- pre-commit * development
- tox * development
- wheel * development
- codecov * test
- pytest * test
- pytest-cov * test
- pytest-qt * test
- pytest-timeout * test
- tox * test
- aslafy-z/conventional-pr-title-action v3 composite
- PyQt5 *
- PyQt5-sip *
- PySide2 *
- PySide6 <6.3.2
- PySide6 *
- imageio *
- npe2 *
- pydantic <2.0
- sentry-sdk *
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.22.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.6.2
- pyside6-addons ==6.6.2
- pyside6-essentials ==6.6.2
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.6.2
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.22.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.13.2
- pyside6 ==6.6.2
- pyside6-addons ==6.6.2
- pyside6-essentials ==6.6.2
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.13.2
- shiboken6 ==6.6.2
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.16
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- autodoc-pydantic ==1.9.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- ipykernel ==6.29.3
- ipython ==8.22.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyopengl ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.13.2
- pyside6 ==6.6.2
- pyside6-addons ==6.6.2
- pyside6-essentials ==6.6.2
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- shiboken2 ==5.13.2
- shiboken6 ==6.6.2
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinx-autodoc-typehints ==2.0.0
- sphinx-qt-documentation ==0.4.1
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.13
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- backcall ==0.2.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2023.5.0
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2023.3.16
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- importlib-resources ==6.1.2
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.12.3
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.24.4
- numpydoc ==1.6.0
- oiffile ==2022.9.29
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.0.3
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.1
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pickleshare ==0.7.5
- pillow ==10.2.0
- pint ==0.21.1
- pkgutil-resolve-name ==1.3.10
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.3.1
- pyside6-addons ==6.3.1
- pyside6-essentials ==6.3.1
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pywavelets ==1.4.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.21.0
- scipy ==1.10.1
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.3.1
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.1.2
- sphinxcontrib-applehelp ==1.0.4
- sphinxcontrib-devhelp ==1.0.2
- sphinxcontrib-htmlhelp ==2.0.1
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.3
- sphinxcontrib-serializinghtml ==1.1.5
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2023.7.10
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.18.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.3.1
- pyside6-addons ==6.3.1
- pyside6-essentials ==6.3.1
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.3.1
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- mpmath * test
- sentry-sdk * test
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.22.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.6.2
- pyside6-addons ==6.6.2
- pyside6-essentials ==6.6.2
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.6.2
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.22.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.13.2
- pyside6 ==6.6.2
- pyside6-addons ==6.6.2
- pyside6-essentials ==6.6.2
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.13.2
- shiboken6 ==6.6.2
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.13
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- backcall ==0.2.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2023.5.0
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2023.3.16
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- importlib-resources ==6.1.2
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.12.3
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.24.4
- numpydoc ==1.6.0
- oiffile ==2022.9.29
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.0.3
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.1
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pickleshare ==0.7.5
- pillow ==10.2.0
- pint ==0.21.1
- pkgutil-resolve-name ==1.3.10
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.3.1
- pyside6-addons ==6.3.1
- pyside6-essentials ==6.3.1
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pywavelets ==1.4.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.21.0
- scipy ==1.10.1
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.3.1
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.1.2
- sphinxcontrib-applehelp ==1.0.4
- sphinxcontrib-devhelp ==1.0.2
- sphinxcontrib-htmlhelp ==2.0.1
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.3
- sphinxcontrib-serializinghtml ==1.1.5
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2023.7.10
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- alabaster ==0.7.16
- altgraph ==0.17.4
- app-model ==0.2.4
- appdirs ==1.4.4
- asttokens ==2.4.1
- attrs ==23.2.0
- babel ==2.14.0
- build ==1.0.3
- cachey ==0.2.1
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- cloudpickle ==3.0.0
- comm ==0.2.1
- coverage ==7.4.3
- czifile ==2019.7.2
- dask ==2024.2.1
- debugpy ==1.8.1
- decorator ==5.1.1
- defusedxml ==0.7.1
- docstring-parser ==0.15
- docutils ==0.20.1
- et-xmlfile ==1.1.0
- exceptiongroup ==1.2.0
- executing ==2.0.1
- fonticon-fontawesome6 ==6.4.0
- freetype-py ==2.4.0
- fsspec ==2024.2.0
- h5py ==3.10.0
- heapdict ==1.0.1
- hsluv ==5.0.4
- idna ==3.6
- imagecodecs ==2024.1.1
- imageio ==2.34.0
- imagesize ==1.4.1
- importlib-metadata ==7.0.1
- in-n-out ==0.1.9
- iniconfig ==2.0.0
- ipykernel ==6.29.3
- ipython ==8.18.1
- jedi ==0.19.1
- jinja2 ==3.1.3
- jsonschema ==4.21.1
- jsonschema-specifications ==2023.12.1
- jupyter-client ==8.6.0
- jupyter-core ==5.7.1
- kiwisolver ==1.4.5
- lazy-loader ==0.3
- local-migrator ==0.1.10
- locket ==1.0.0
- lxml ==5.1.0
- magicgui ==0.8.1
- mahotas ==1.4.13
- markdown-it-py ==3.0.0
- markupsafe ==2.1.5
- matplotlib-inline ==0.1.6
- mdurl ==0.1.2
- mpmath ==1.3.0
- mypy-extensions ==1.0.0
- napari ==0.4.19.post1
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- nest-asyncio ==1.6.0
- networkx ==3.2.1
- nme ==0.1.8
- npe2 ==0.7.4
- numpy ==1.26.4
- numpydoc ==1.6.0
- oiffile ==2023.8.30
- openpyxl ==3.1.2
- packaging ==23.2
- pandas ==2.2.1
- parso ==0.8.3
- partd ==1.4.1
- partsegcore-compiled-backend ==0.15.6
- partsegdata ==0.10.0
- pexpect ==4.9.0
- pillow ==10.2.0
- pint ==0.23
- platformdirs ==4.2.0
- pluggy ==1.4.0
- pooch ==1.8.1
- prompt-toolkit ==3.0.43
- psutil ==5.9.8
- psygnal ==0.9.5
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyconify ==0.1.6
- pydantic ==1.10.14
- pydantic-compat ==0.1.2
- pygments ==2.17.2
- pyinstaller ==6.4.0
- pyinstaller-hooks-contrib ==2024.1
- pyopengl ==3.1.7
- pyopengl-accelerate ==3.1.7
- pyproject-hooks ==1.0.0
- pyqt5 ==5.15.10
- pyqt5-qt5 ==5.15.2
- pyqt5-sip ==12.13.0
- pyqt6 ==6.6.1
- pyqt6-qt6 ==6.6.2
- pyqt6-sip ==13.6.0
- pyside2 ==5.15.2.1
- pyside6 ==6.3.1
- pyside6-addons ==6.3.1
- pyside6-essentials ==6.3.1
- pytest ==8.0.2
- pytest-qt ==4.4.0
- pytest-timeout ==2.2.0
- python-dateutil ==2.8.2
- pytz ==2024.1
- pyyaml ==6.0.1
- pyzmq ==25.1.2
- qtawesome ==1.3.0
- qtconsole ==5.5.1
- qtpy ==2.4.1
- referencing ==0.33.0
- requests ==2.31.0
- rich ==13.7.1
- rpds-py ==0.18.0
- scikit-image ==0.22.0
- scipy ==1.12.0
- sentry-sdk ==1.40.6
- setuptools ==69.1.1
- shiboken2 ==5.15.2.1
- shiboken6 ==6.3.1
- simpleitk ==2.3.1
- six ==1.16.0
- snowballstemmer ==2.2.0
- sphinx ==7.2.6
- sphinxcontrib-applehelp ==1.0.8
- sphinxcontrib-devhelp ==1.0.6
- sphinxcontrib-htmlhelp ==2.0.5
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.7
- sphinxcontrib-serializinghtml ==1.1.10
- stack-data ==0.6.3
- superqt ==0.6.1
- sympy ==1.12
- tabulate ==0.9.0
- tifffile ==2024.2.12
- tomli ==2.0.1
- tomli-w ==1.0.0
- toolz ==0.12.1
- tornado ==6.4
- tqdm ==4.66.2
- traceback-with-variables ==2.0.4
- traitlets ==5.14.1
- typer ==0.9.0
- typing-extensions ==4.10.0
- tzdata ==2024.1
- urllib3 ==2.2.1
- vispy ==0.14.1
- wcwidth ==0.2.13
- wrapt ==1.16.0
- xlrd ==2.0.1
- xlsxwriter ==3.2.0
- zipp ==3.17.0
- pydantic <2