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cloud-genomics

Introduction to Cloud Computing for Genomics

https://github.com/datacarpentry/cloud-genomics

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 7 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (3.9%) to scientific vocabulary

Keywords

carpentries cloud data-carpentry english genomics lesson shell stable
Last synced: 4 months ago · JSON representation ·

Repository

Introduction to Cloud Computing for Genomics

Basic Info
Statistics
  • Stars: 21
  • Watchers: 13
  • Forks: 51
  • Open Issues: 10
  • Releases: 3
Topics
carpentries cloud data-carpentry english genomics lesson shell stable
Created over 8 years ago · Last pushed 4 months ago
Metadata Files
Readme Contributing License Code of conduct Citation Authors Zenodo

README.md

DOI

Create a Slack Account with us Slack Status

cloud-genomics

Lesson on Cloud/HPC for genomics lessons

Code of Conduct

All participants should agree to abide by The Carpentries Code of Conduct.

Current Maintainers

Contributors:

Citation

Please cite as:

Raniere Silva, Greg Wilson, François Michonneau, Bob Freeman, Amanda Charbonneau, Jason Williams, … Kari L. Jordan, PhD. (2019, June). datacarpentry/cloud-genomics: Data Carpentry: Introduction to Cloud Computing for genomics, June 2019 (Version v2019.06.1). Zenodo. http://doi.org/10.5281/zenodo.3260674

Owner

  • Name: Data Carpentry
  • Login: datacarpentry
  • Kind: organization
  • Email: team@carpentries.org

Workshops teaching scientists basic skills for retrieving, viewing, managing, and manipulating data in an open and reproducible way.

Citation (CITATION) 

Please cite as:

Raniere Silva; Greg Wilson; François Michonneau; Bob Freeman; Amanda Charbonneau; Jason Williams; Erin Becker; Tracy Teal; Maxim Belkin; Caryn Johansen; Abigail Cabunoc Mayes; Taylor Reiter; Katrin Leinweber; Darya Vanichkina; Adina Howe; Chris Fields; Brittany N. Lasseigne, PhD; Rémi Emonet; Bérénice Batut; Thomas Morrell; Stephen Turner; Piotr Banaszkiewicz; David Mawdsley; William L. Close; Michael R. Crusoe; Jemma Stachelek; ammatsun; Renato Alves; vuw-ecs-kevin; Kari L. Jordan, PhD (2019, June). datacarpentry/cloud-genomics: Data Carpentry: Introduction to Cloud Computing for genomics, June 2019 (Version v2019.06.1). Zenodo. http://doi.org/10.5281/zenodo.3260674

GitHub Events

Total
  • Watch event: 1
  • Delete event: 5
  • Issue comment event: 4
  • Push event: 47
  • Pull request event: 8
  • Fork event: 3
  • Create event: 5
Last Year
  • Watch event: 1
  • Delete event: 5
  • Issue comment event: 4
  • Push event: 47
  • Pull request event: 8
  • Fork event: 3
  • Create event: 5

Issues and Pull Requests

Last synced: 4 months ago

All Time
  • Total issues: 0
  • Total pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: 2 months
  • Total issue authors: 0
  • Total pull request authors: 5
  • Average comments per issue: 0
  • Average comments per pull request: 0.5
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 5
  • Average time to close issues: N/A
  • Average time to close pull requests: 22 days
  • Issue authors: 0
  • Pull request authors: 5
  • Average comments per issue: 0
  • Average comments per pull request: 0.4
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • annajiat (1)
Pull Request Authors
  • carpentries-bot (3)
  • maneesha (1)
  • jsta (1)
  • NilaBlueshirt (1)
  • ErinBecker (1)
  • fishercera (1)
Top Labels
Issue Labels
Pull Request Labels
type: template and tools (3)

Dependencies

.github/workflows/pr-close-signal.yaml actions
  • actions/upload-artifact v3 composite
.github/workflows/pr-comment.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/comment-diff main composite
  • carpentries/actions/download-workflow-artifact main composite
.github/workflows/pr-post-remove-branch.yaml actions
  • carpentries/actions/download-workflow-artifact main composite
  • carpentries/actions/remove-branch main composite
.github/workflows/pr-preflight.yaml actions
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/comment-diff main composite
.github/workflows/pr-receive.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/setup-lesson-deps main composite
  • carpentries/actions/setup-sandpaper main composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/sandpaper-main.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/setup-lesson-deps main composite
  • carpentries/actions/setup-sandpaper main composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/update-cache.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-credentials main composite
  • carpentries/actions/update-lockfile main composite
  • carpentries/create-pull-request main composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/update-workflows.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-credentials main composite
  • carpentries/actions/update-workflows main composite
  • carpentries/create-pull-request main composite