si-anomalous_salt

Electronic Notebook: Anomalous Salt Dependence Reveals an Interplay of Attractive and Repulsive Electrostatic Interactions in α-synuclein Fibril Formation

https://github.com/mlund/si-anomalous_salt

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 3 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (8.2%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Electronic Notebook: Anomalous Salt Dependence Reveals an Interplay of Attractive and Repulsive Electrostatic Interactions in α-synuclein Fibril Formation

Basic Info
  • Host: GitHub
  • Owner: mlund
  • License: cc-by-4.0
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 80.2 MB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 0
  • Open Issues: 0
  • Releases: 3
Created about 2 years ago · Last pushed 10 months ago
Metadata Files
Readme License Code of conduct Zenodo

README.md

Binder CC BY 4.0 ruff DOI

Electronic Notebook: Anomalous Salt Dependence Reveals an Interplay of Attractive and Repulsive Electrostatic Interactions in α-synuclein Fibril Formation

This is supporting information for the theoretical parts of the research article https://doi.org/10.1017/qrd.2020.7

Layout

Description of the directory layout.

  • monte-carlo/ Metropolis-Hastings Monte Carlo output data and analysis
  • simple-model/ Illustrates a simple electrostatic model

Requirements

To run the Notebooks online, click on the Launch Binder badge above. Alternatively, to run on your own computer, install Python using e.g. Miniforge or Anaconda and make sure all required packages are loaded by issuing the following terminal commands

bash conda env create -f environment.yml source activate asalt jupyter-lab

Owner

  • Name: Mikael Lund
  • Login: mlund
  • Kind: user
  • Location: Lund, Sweden
  • Company: Lund University

GitHub Events

Total
  • Push event: 8
  • Pull request event: 1
  • Create event: 1
Last Year
  • Push event: 8
  • Pull request event: 1
  • Create event: 1

Committers

Last synced: 7 months ago

All Time
  • Total Commits: 22
  • Total Committers: 2
  • Avg Commits per committer: 11.0
  • Development Distribution Score (DDS): 0.273
Past Year
  • Commits: 9
  • Committers: 2
  • Avg Commits per committer: 4.5
  • Development Distribution Score (DDS): 0.333
Top Committers
Name Email Commits
Mikael Lund M****d@m****m 16
mlund m****d@l****t 6
Committer Domains (Top 20 + Academic)
mac.com: 1

Issues and Pull Requests

Last synced: 7 months ago


Dependencies

.github/workflows/ruff.yml actions
  • actions/checkout v4 composite
  • jpetrucciani/ruff-check main composite
environment.yml pypi
pyproject.toml pypi