Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (9.3%) to scientific vocabulary
Repository
processing low-coverage vcf files
Basic Info
- Host: GitHub
- Owner: Suuuuuuuus
- License: mit
- Language: Python
- Default Branch: main
- Size: 172 KB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
lcwgsus: processing low-coverage vcf files
Lcwgsus is a Python package written to perform downstream low-coverage whole-genome sequencing (lcWGS) analysis, hence more of personal use at all releases at the forseeable feature. This package will be properly editted and formatted if related works are about to be published.
Documentation
Online documentation is currently UNAVAILABLE, due to its lack of priority :)
However, feel free to reach out, submit bugs, and/or make suggestions on improvement of this library. All are welcomed!
Dependencies
Lcwgsus supports Python 3.8+.
Installation requires numpy, pandas, matplotlib, seaborn, statsmodels, and scipy.
Dependencies
Lcwgsus is not a published work, so citing the GitHub repo suffices. Please refer to the CITATION.cff file.
Development
See the main site of lcwgsus: https://github.com/Suuuuuuuus/lcwgsus.
Bugs shall be submitted to the issue tracker. Please kindly provide a REPRODUCIBLE example demonstrating the problem, otherwise debugging per se is foolhardy :)
Owner
- Name: Sus
- Login: Suuuuuuuus
- Kind: user
- Repositories: 1
- Profile: https://github.com/Suuuuuuuus
Sus the pig!
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: lcwgsus
message: >-
Lcwgsus hasn't yet been published, so citing the website
is enough.
type: software
authors:
- given-names: Sus
email: bjzzp01@163.com
repository-code: 'https://github.com/Suuuuuuuus/lcwgsus'
url: 'https://pypi.org/project/lcwgsus/'
abstract: >-
A Python package written to perform downstream
low-coverage whole-genome sequencing (lcWGS) analysis
keywords:
- low-coverage whole-genome sequencing
- vcf
- imputation
- allele frequency
- QUILT
license: MIT
version: 0.0.1
date-released: '2023-12-04'
GitHub Events
Total
- Push event: 16
Last Year
- Push event: 16
Packages
- Total packages: 1
-
Total downloads:
- pypi 13 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 1
- Total maintainers: 1
pypi.org: lcwgsus
Downstream lcWGS analysis
- Documentation: https://lcwgsus.readthedocs.io/
- License: MIT License
-
Latest release: 0.0.1
published over 2 years ago
Rankings
Maintainers (1)
Dependencies
- matplotlib >=3.4
- numpy *
- pandas >=1.2
- scipy *
- seaborn *
- statsmodels *