vizchemoton - Release 1.0.0

First Open Release of VizChemoton

• Creates a standalone HTML file for the chemical reactions network (CRN) constructed with Chemoton, allowing the user to interact with the compounds and reactions of the network directly via a browser.
  
• There are three implemented options to render the HTML file:
  
  1. Iterating through the reactions collection in the MongoDB where the exploration data is stored (MongoDB connection required).
     
  2. Iterating through the precompiled PATHFinder JSON file where the CRN is already defined (MongoDB connection required).
     
  3. Iterating through the precompiled compounds.json and reactions.csv files (MongoDB *not** required)*.
     
• This release includes a user-friendly YAML input file that provides access to the features described above. Default values are set so that VizChemoton runs using option (iii).
• The labeling of the compounds and flasks is systematic, ensuring that if the user wishes to upload the data to ioChem-BD, the labels appearing in the HTML file match those in the online repository.

- HTML
Published by petrusen about 1 year ago