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omics-exercises

Extra materials or datasets for single-cell RNA-seq teaching

https://github.com/tavareshugo/omics-exercises

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (2.0%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Extra materials or datasets for single-cell RNA-seq teaching

Basic Info
  • Host: GitHub
  • Owner: tavareshugo
  • License: other
  • Language: Lua
  • Default Branch: main
  • Size: 878 KB
Statistics
  • Stars: 0
  • Watchers: 0
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created 9 months ago · Last pushed 8 months ago
Metadata Files
Readme License Citation

README.md

Single-cell RNA-seq exercises

This repository contains the materials for the course.

Course Developers: see our guidelines page if contributing materials.

These materials are released under a CC BY 4.0 license.

Owner

  • Name: Hugo Tavares
  • Login: tavareshugo
  • Kind: user
  • Location: Cambridge, UK
  • Company: University of Cambridge

Citation (CITATION.cff) 

# Note: we use the author alias to record author contributions
# This is a known limitation of CFF files: https://github.com/citation-file-format/citation-file-format/issues/112
# Suggested author roles are given here: https://cambiotraining.github.io/quarto-course-template/materials/03-authorship.html#author-roles

cff-version: 1.2.0
title: "Single-cell RNA-seq exercises"
message: >-
  You may cite these materials using the metadata in this
  file. Please cite our materials if you publish materials
  derived from these, run a workshop using them, or use
  the information in your own work.
type: dataset
authors:
  - given-names: Hugo
    family-names: Tavares
    affiliation: Research Informatics Training, University of Cambridge
    website: 'https://bioinfotraining.bio.cam.ac.uk/staff/hugo-tavares-phd'
    orcid: 'https://orcid.org/0000-0001-9373-2726'
    alias: 'writing - original draft; conceptualisation; software'
repository-code: "https://github.com/cambiotraining/single-cell-rnaseq-exercises"
url: "https://cambiotraining.github.io/single-cell-rnaseq-exercises/"
license: CC-BY-4.0
commit: "FIX: commit hash"
date-released: "2025-06-23"

GitHub Events

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  • Push event: 3
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Dependencies

.github/workflows/publish_site.yml actions
  • JamesIves/github-pages-deploy-action 4.1.0 composite
  • actions/checkout v2 composite
  • quarto-dev/quarto-actions/setup v2 composite