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ocean-observations-pysomffn

Ocean observations subgroup

https://github.com/inmos-obvi/ocean-observations-pysomffn

Science Score: 49.0%

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    CITATION.cff file
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    Found 2 DOI reference(s) in README
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    Links to: zenodo.org
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    Low similarity (9.4%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Ocean observations subgroup

Basic Info
  • Host: GitHub
  • Owner: inmos-obvi
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 71.6 MB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 1
  • Open Issues: 0
  • Releases: 2
Created about 1 year ago · Last pushed 9 months ago
Metadata Files
Readme License Zenodo

README.md

PySOMFFN

DOI

DESCRIPTION

Core file for running Self-Organising Map - Feed Forward Network (SOM-FFN) method based on the MATLAB implementation of Peter Landschuetzer and originally described in Landschuetzer et al. (2013) Biogeosciences.

This Python implementation is under development within the Past, Present and Future Marine Climate Change Group of the Flanders Marine Institute (VLIZ), Belgium.

This Python implementation is separated into 2 classes:
- SelfOrganisingMap
- FeedForwardNetwork
The functions contained in these classes are described in detail within the code files. These class files are written with the intention to be used together or separately. There are a range of optional functions but some functions must be used sequentially and this is indicated.

Input and output data files are supported in MATLAB (.mat), for legacy support and comparison with existing SOM-FFN, and netCDF (.nc) formats.

Figure plotting is currently supported for PNG format only.

Please contact Creators regarding test data and input data requirements.

DEPENDENCIES

PySOMFFN is written in and uses the Python environment and requires:
- Python version 3.12.3

The classes and their functions are dependent on the following packages:
- CartoPy 0.22.0
- MatPlotLib 3.6.3
- MiniSom 2.3.3 (https://github.com/JustGlowing/minisom)
- NumPy 1.26.4
- SciPy 1.11.4
- SKlearn 1.11.4
- TensorFlow 2.18.0 (https://www.tensorflow.org/)
- Xarray 2024.2.0

Owner

  • Login: inmos-obvi
  • Kind: user

GitHub Events

Total
  • Release event: 2
  • Push event: 6
  • Pull request event: 3
  • Fork event: 1
  • Create event: 2
Last Year
  • Release event: 2
  • Push event: 6
  • Pull request event: 3
  • Fork event: 1
  • Create event: 2