marine_qc

Marine Quality Control toolbox

https://github.com/glamod/marine_qc

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Marine Quality Control toolbox

README.rst

==================================================================
Marine Quality Control: ``marine_qc`` toolbox
==================================================================

+----------------------------+----------------------------------------------------------------+
| Versions                   | |pypi| |versions|                                              |
+----------------------------+----------------------------------------------------------------+
| Documentation and Support  | |docs|                                                         |
+----------------------------+----------------------------------------------------------------+
| Open Source                | |license| |zenodo|                                             |
+----------------------------+----------------------------------------------------------------+
|                            | |fair-software| |ossf|                                         |
+----------------------------+----------------------------------------------------------------+
| Coding Standards           | |black| |ruff| |pre-commit| |codefactor|                       |
+----------------------------+----------------------------------------------------------------+
|                            | |security| |fossa|                                             |
+----------------------------+----------------------------------------------------------------+
| Development Status         | |status| |build| |coveralls|                                   |
+----------------------------+----------------------------------------------------------------+
| Funding                    | |c3s|                                                          |
+----------------------------+----------------------------------------------------------------+

Introduction
============

This Python package provides a set of tools for quality control (QC) of marine meteorological reports. Marine
meteorological reports typically comprise latitude, longitude, time, and date as well as one or more marine
meteorological variables often including, but not limited to sea-surface temperature, air temperature, dew point
temperature, sea level pressure, wind speed and wind direction. Quality control is the process of identifying and
flagging reports and variables within reports that are likely to be in gross error. It is important to note that
QC checks do not (and cannot) identify all incorrect reports and they can also identify good reports as being
erroneous.


Installation
============

Installation using pip
----------------------

This repository has not been release on pypi yet.
-------------------------------------------------

You can install the package directly from pip:

.. code-block:: console

    pip install marine_qc

If you want to contribute, we recommend cloning the repository and installing the package in development mode, e.g.

.. code-block:: console

    git clone https://github.com/glamod/marine_qc
    cd marine_qc
    pip install -e .

This will install the package but you can still edit it and you don't need the package in your :code:`PYTHONPATH`

Installation using uv
---------------------

You can install the package using `uv`_ package manager, this will add the library to your active environment:

.. code-block:: console

    uv add marine_qc

To develop the package using uv, the following will create a virtual environment, uv defaults to ``.venv``:

.. code-block:: console

    git clone https://github.com/glamod/marine_qc
    cd marine_qc
    uv venv --python 3.12      # Create an environment with the recommended python version
    source .venv/bin/activate  # Load the virtual environment (for bash or zsh)
    uv sync


Contributing to marine_qc
=========================

If you're interested in participating in the development of ``marine_qc`` by suggesting new features, new indices or report bugs, please leave us a message on the `issue tracker`_.

If you would like to contribute code or documentation (which is greatly appreciated!), check out the `Contributing Guidelines`_ before you begin!

How to cite this library
========================

If you wish to cite `marine_qc` in a research publication, we kindly ask that you refer to Zenodo: .

License
=======

This is free software: you can redistribute it and/or modify it under the terms of the `Apache License 2.0`_. A copy of this license is provided in the code repository (`LICENSE`_).

Credits
=======

``marine_qc`` development is funded through Copernicus Climate Change Service (C3S_).

This package was created with Cookiecutter_ and the `audreyfeldroy/cookiecutter-pypackage`_ project template.

.. hyperlinks

.. _Apache License 2.0: https://opensource.org/license/apache-2-0/

.. _audreyfeldroy/cookiecutter-pypackage: https://github.com/audreyfeldroy/cookiecutter-pypackage/

.. _C3S: https://climate.copernicus.eu/

.. _Contributing Guidelines: https://github.com/glamod/marine_qc/blob/main/CONTRIBUTING.rst

.. _Cookiecutter: https://github.com/cookiecutter/cookiecutter/

.. _LICENSE: https://github.com/glamod/marine_qc/blob/main/LICENSE

.. _issue tracker: https://github.com/glamod/marine_qc/issues

.. _uv: https://docs.astral.sh/uv/

.. |build| image:: https://github.com/glamod/marine_qc/actions/workflows/testing-suite.yml/badge.svg
        :target: https://github.com/glamod/marine_qc/actions/workflows/testing-suite.yml
        :alt: Build Status

.. |black| image:: https://img.shields.io/badge/code%20style-black-000000.svg
        :target: https://github.com/psf/black
        :alt: Python Black

.. |c3s| image:: https://img.shields.io/badge/Powered%20by-Copernicus%20Climate%20Change%20Service-blue.svg
        :target: https://climate.copernicus.eu/
        :alt: Funding

.. |codefactor| image:: https://www.codefactor.io/repository/github/glamod/marine_qc/badge
		    :target: https://www.codefactor.io/repository/github/glamod/marine_qc
		    :alt: CodeFactor

.. |coveralls| image:: https://codecov.io/gh/glamod/marine_qc/branch/main/graph/badge.svg
	      :target: https://codecov.io/gh/glamod/marine_qc
	      :alt: Coveralls

.. |docs| image:: https://readthedocs.org/projects/marine_qc/badge/?version=latest
	:target: https://marine-qc.readthedocs.io/en/latest/
        :alt: Documentation Status

.. |fair-software| image:: https://img.shields.io/badge/fair--software.eu-%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8F-green
   	    :target: https://fair-software.eu
	      :alt: FAIR-software

.. |fossa| image:: https://app.fossa.com/api/projects/git%2Bgithub.com%2Fglamod%2Fmarine_qc.svg?type=shield
        :target: https://app.fossa.com/projects/git%2Bgithub.com%2Fglamod%2Fmarine_qc?ref=badge_shield
        :alt: FOSSA

.. |license| image:: https://img.shields.io/github/license/glamod/marine_qc.svg
        :target: https://github.com/glamod/marine_qc/blob/main/LICENSE
        :alt: License

.. |ossf| image:: https://api.securityscorecards.dev/projects/github.com/glamod/marine_qc/badge
        :target: https://securityscorecards.dev/viewer/?uri=github.com/glamod/marine_qc
        :alt: OpenSSF Scorecard

.. |pre-commit| image:: https://results.pre-commit.ci/badge/github/glamod/marine_qc/main.svg
        :target: https://results.pre-commit.ci/latest/github/glamod/marine_qc/main
        :alt: pre-commit.ci status

.. |pypi| image:: https://img.shields.io/pypi/v/marine_qc.svg
        :target: https://pypi.python.org/pypi/marine_qc
        :alt: Python Package Index Build

.. |ruff| image:: https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/ruff/main/assets/badge/v2.json
        :target: https://github.com/astral-sh/ruff
        :alt: Ruff

.. |security| image:: https://bestpractices.coreinfrastructure.org/projects/10980/badge
	      :target: https://bestpractices.coreinfrastructure.org/projects/10980
	      :alt: OpenSSf Best Practices

.. |status| image:: https://www.repostatus.org/badges/latest/concept.svg
        :target: https://www.repostatus.org/#concept
        :alt: Project Status: Concept – Minimal or no implementation has been done yet, or the repository is only intended to be a limited example, demo, or proof-of-concept.

.. |versions| image:: https://img.shields.io/pypi/pyversions/marine_qc.svg
        :target: https://pypi.python.org/pypi/marine_qc
        :alt: Supported Python Versions

.. |zenodo| image:: https://zenodo.org/badge/DOI/10.5281/zenodo..svg
        :target: https://doi.org/10.5281/zenodo.
 	:alt: DOI

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