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Recent Releases of tidySingleCellExperiment

tidySingleCellExperiment - Improve aggregate and nest

What's Changed

  • Fix aggregate with rowdata by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/104
  • R dependency by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/105
  • update nest to use cell numeric id rather than original id which can … by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/106

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.13.3...v1.15.2

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Published by stemangiola almost 2 years ago

tidySingleCellExperiment - v1.13.3

What's Changed

  • Add slice functions by @noriakis in https://github.com/stemangiola/tidySingleCellExperiment/pull/90
  • Improve documentation by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/94
  • Allow y as S4 DataFrame in *_join() by @lambdamoses in https://github.com/stemangiola/tidySingleCellExperiment/pull/98
  • Refactor *_join functions with function factory by @lambdamoses in https://github.com/stemangiola/tidySingleCellExperiment/pull/99
  • Improve plot_ly by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/100
  • fix-biocCHECK by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/102
  • group_split by @B0ydT in https://github.com/stemangiola/tidySingleCellExperiment/pull/97

New Contributors

  • @noriakis made their first contribution in https://github.com/stemangiola/tidySingleCellExperiment/pull/90
  • @lambdamoses made their first contribution in https://github.com/stemangiola/tidySingleCellExperiment/pull/98
  • @B0ydT made their first contribution in https://github.com/stemangiola/tidySingleCellExperiment/pull/97

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.11.6...v1.13.3

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Published by stemangiola about 2 years ago

tidySingleCellExperiment - v1.11.6

What's Changed

  • revise unit tests tidySingleCellExperiment by @HelenaLC in https://github.com/stemangiola/tidySingleCellExperiment/pull/79
  • cleaning BiocCheck(); linting revision; GHA bump to Bioc devel by @HelenaLC in https://github.com/stemangiola/tidySingleCellExperiment/pull/83
  • add argument to aggregate_cells by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/87
  • Speedup aggregate cells by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/86

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.11.4...v1.11.6

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Published by stemangiola over 2 years ago

tidySingleCellExperiment - v1.11.4

What's Changed

  • Add summarize as an explicit alias of the function summarise by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/67
  • Drop bind generics by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/68
  • doc revision by @HelenaLC in https://github.com/stemangiola/tidySingleCellExperiment/pull/75
  • +@name tags; +missing doc for inner_join by @HelenaLC in https://github.com/stemangiola/tidySingleCellExperiment/pull/77
  • update README and Vignette by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/78

New Contributors

  • @HelenaLC made their first contribution in https://github.com/stemangiola/tidySingleCellExperiment/pull/75

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.11.1...v1.11.4

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Published by stemangiola over 2 years ago

tidySingleCellExperiment - Release update for Bioc2023

What's Changed

  • Use generic aggregate cells from ttservice by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/64

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.9.4...v1.11.1

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Published by stemangiola over 2 years ago

tidySingleCellExperiment - Release update for RMedicine2023

What's Changed

  • fix tidyr by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/53
  • Add count drop generics by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/55
  • Added aggregate cells function and dependencies by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/57
  • Added aggregate cells function to README and vignette by @william-hutchison in https://github.com/stemangiola/tidySingleCellExperiment/pull/59

New Contributors

  • @william-hutchison made their first contribution in https://github.com/stemangiola/tidySingleCellExperiment/pull/57

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.9.1...v1.9.4

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Published by stemangiola over 2 years ago

tidySingleCellExperiment - DEVELOPMENT_3_17

What's Changed

  • Fix README by @mblue9 in https://github.com/stemangiola/tidySingleCellExperiment/pull/46
  • Make assay output shorter by @mblue9 in https://github.com/stemangiola/tidySingleCellExperiment/pull/50
  • fix asmetadata by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/51
  • Fix unique special columns by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/52

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.7.4...v1.9.1

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Published by stemangiola about 3 years ago

tidySingleCellExperiment - BioC2022

What's Changed

  • Update Depends R version to 4.1 by @mblue9 in https://github.com/stemangiola/tidySingleCellExperiment/pull/44
  • Print hotifx by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/47

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.7.2...v1.7.4

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Published by stemangiola over 3 years ago

tidySingleCellExperiment - For BioC2022

What's Changed

  • use ttservice by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/36
  • deprecate cell column by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/39
  • Dev by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/37
  • Update action to bioc 3.14 by @mblue9 in https://github.com/stemangiola/tidySingleCellExperiment/pull/40
  • Print hotifx by @stemangiola in https://github.com/stemangiola/tidySingleCellExperiment/pull/41
  • Update github action to Bioc 3.15 by @mblue9 in https://github.com/stemangiola/tidySingleCellExperiment/pull/42

Full Changelog: https://github.com/stemangiola/tidySingleCellExperiment/compare/v1.3.2...v1.7.2

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Published by stemangiola over 3 years ago

tidySingleCellExperiment - Bioconductor 3.14 - Used for BiocAsia2021

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Published by stemangiola over 4 years ago

tidySingleCellExperiment - Bioconductor 3.13 - used for Bioc2021

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Published by stemangiola over 4 years ago

tidySingleCellExperiment - BioCAsia2020-update-print

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Published by stemangiola over 5 years ago

tidySingleCellExperiment - BioCAsia2020

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Published by stemangiola over 5 years ago