Recent Releases of epitome
epitome - v1.5.5
What's Changed
- Dev by @DOH-JDJ0303 in https://github.com/DOH-JDJ0303/epitome/pull/12
- Bump dawidd6/action-download-artifact from 2 to 6 in /.github/workflows by @dependabot in https://github.com/DOH-JDJ0303/epitome/pull/11
New Contributors
- @dependabot made their first contribution in https://github.com/DOH-JDJ0303/epitome/pull/11
Full Changelog: https://github.com/DOH-JDJ0303/epitome/compare/v1.5.0...v1.5.5
- Nextflow
Published by DOH-JDJ0303 12 months ago
epitome - v1.5.0
Major changes to how input handling, metadata wrangling, and clustering.
Input handling: - EPITOME will now automatically download all complete sequences and associated metadata, unless told not to. - Input QC is now handled in R, rather than Bash to aid metadata capture on the backend
Clustering: - Switched from Mash to Sourmash for better ANI prediction
Metadata: - Sequence metadata is now summarized for each reference. This can be used for things like predicting sample taxonomy or host based on the reference genome metadata.
- Nextflow
Published by DOH-JDJ0303 about 1 year ago