Science Score: 46.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
2 of 18 committers (11.1%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (12.4%) to scientific vocabulary
Keywords
2d
3d
4d
computed-tomography
dicom
feature-extraction
graph-cut
image-classification
image-processing
image-segmentation
itk
machine-learning
magnetic-resonance-imaging
medical
medpy
mha
mhd
nifti-format
python
simpleitk
Keywords from Contributors
qt
closember
gtk
tk
wx
neuroimaging
alignment
registration
Last synced: 6 months ago
·
JSON representation
Repository
Medical image processing in Python
Basic Info
- Host: GitHub
- Owner: loli
- License: gpl-3.0
- Language: Jupyter Notebook
- Default Branch: master
- Homepage: http://loli.github.io/medpy/
- Size: 12.5 MB
Statistics
- Stars: 598
- Watchers: 20
- Forks: 141
- Open Issues: 2
- Releases: 11
Topics
2d
3d
4d
computed-tomography
dicom
feature-extraction
graph-cut
image-classification
image-processing
image-segmentation
itk
machine-learning
magnetic-resonance-imaging
medical
medpy
mha
mhd
nifti-format
python
simpleitk
Created almost 14 years ago
· Last pushed over 1 year ago
Metadata Files
Readme
Changelog
License
README.md
GitHub | Documentation | Tutorials | Issue tracker
medpy - Medical Image Processing in Python
MedPy is an image processing library and collection of scripts targeted towards medical (i.e. high dimensional) image processing.
Stable releases
- Download (stable release): https://pypi.python.org/pypi/medpy
- HTML documentation and installation instruction (stable release): http://loli.github.io/medpy/
- Download from Conda-Forge: https://anaconda.org/conda-forge/medpy
Development version
- Download (development version): https://github.com/loli/medpy
- HTML documentation and installation instruction (development version): create this from doc/ folder following instructions in contained README file
Contribute
- Clone
masterbranch from github - Install pre-commit hooks or with
[dev,test]extras - Submit your change as a PR request
Python 2 version
Python 2 is no longer supported. But you can still use the older releases <=0.3.0.
Other links
- Issue tracker: https://github.com/loli/medpy/issues
Owner
- Name: Oskar M.
- Login: loli
- Kind: user
- Repositories: 21
- Profile: https://github.com/loli
GitHub Events
Total
- Issues event: 1
- Watch event: 26
- Issue comment event: 5
- Fork event: 5
Last Year
- Issues event: 1
- Watch event: 26
- Issue comment event: 5
- Fork event: 5
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Oskar Maier | o****r@g****m | 265 |
| Alex Rothberg | a****g@g****m | 9 |
| Pradeep Reddy Raamana | r****a@g****m | 4 |
| Oskar Maier | o****r@o****e | 4 |
| Oskar Maier | m****r@h****e | 3 |
| Alexander Ruesch | r****h@m****e | 3 |
| mamrehn | m****n | 2 |
| Kirai | k****g@g****m | 1 |
| Michael Ahern | m****n@g****m | 1 |
| Pradeep Reddy Raamana | p****a@r****g | 1 |
| S. Gay | s****7@g****m | 1 |
| Jay Joshi | j****1@g****m | 1 |
| loli | l****i@l****) | 1 |
| Fabian Isensee | i****f@g****m | 1 |
| joncrall | j****l@k****m | 1 |
| Remi Beges | r****s@g****m | 1 |
| Jingnan Jia | 3****a | 1 |
| Nicolas Cedilnik | 7****k | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 79
- Total pull requests: 43
- Average time to close issues: about 1 year
- Average time to close pull requests: 3 months
- Total issue authors: 48
- Total pull request authors: 17
- Average comments per issue: 2.71
- Average comments per pull request: 1.07
- Merged pull requests: 35
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 1
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 1
Top Authors
Issue Authors
- loli (21)
- cancan101 (6)
- raamana (5)
- hubutui (2)
- Overdrivr (2)
- nbianka99 (1)
- xxgh (1)
- pykao (1)
- TheInfamousWayne (1)
- John1231983 (1)
- musman2012 (1)
- qianshuqinghan (1)
- Halimeh-manaf (1)
- StenSipma (1)
- jiapei100 (1)
Pull Request Authors
- loli (22)
- cancan101 (9)
- StellarStorm (3)
- raamana (2)
- ChekrounMohammed (2)
- harshamarupudi56 (2)
- dependabot[bot] (2)
- Jingnan-Jia (2)
- Erotemic (1)
- iamahern (1)
- JudeSafo (1)
- Overdrivr (1)
- FabianIsensee (1)
- ghost (1)
- nicolascedilnik (1)
Top Labels
Issue Labels
enhancement (17)
bug (17)
documentation (6)
python3 issue (6)
wontfix (2)
question (1)
Pull Request Labels
dependencies (2)
python3 issue (1)
Packages
- Total packages: 3
-
Total downloads:
- pypi 23,346 last-month
- Total docker downloads: 326
-
Total dependent packages: 15
(may contain duplicates) -
Total dependent repositories: 235
(may contain duplicates) - Total versions: 12
- Total maintainers: 2
pypi.org: medpy
Medical image processing in Python
- Homepage: https://github.com/loli/medpy
- Documentation: https://medpy.readthedocs.io/
- License: LICENSE.txt
-
Latest release: 0.5.2
published over 1 year ago
Rankings
Dependent packages count: 0.8%
Dependent repos count: 1.0%
Downloads: 2.3%
Average: 2.4%
Stargazers count: 2.8%
Docker downloads count: 3.1%
Forks count: 4.2%
Maintainers (1)
Last synced:
6 months ago
conda-forge.org: medpy
- Homepage: https://github.com/loli/medpy
- License: GPL-2.0-or-later
-
Latest release: 0.4.0
published over 3 years ago
Rankings
Forks count: 16.1%
Stargazers count: 17.9%
Dependent repos count: 20.1%
Average: 26.4%
Dependent packages count: 51.5%
Last synced:
6 months ago
pypi.org: medpy2
Medical image processing in Python
- Documentation: https://medpy2.readthedocs.io/
- License: LICENSE.txt
- Status: removed
-
Latest release: 0.0.2
published almost 2 years ago
Rankings
Dependent packages count: 9.8%
Average: 37.1%
Dependent repos count: 64.4%
Maintainers (1)
Last synced:
6 months ago
Dependencies
requirements-dev.in
pypi
- nose * development
requirements-dev.txt
pypi
- nose ==1.3.7 development
setup.py
pypi
- SimpleITK *
- numpy *
- scipy *