rkin

Estimate Niche space using Kernel Density Estimates

https://github.com/salbeke/rkin

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    2 of 3 committers (66.7%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.9%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Estimate Niche space using Kernel Density Estimates

Basic Info
  • Host: GitHub
  • Owner: salbeke
  • Language: R
  • Default Branch: development
  • Size: 93.8 KB
Statistics
  • Stars: 4
  • Watchers: 1
  • Forks: 0
  • Open Issues: 6
  • Releases: 0
Created over 9 years ago · Last pushed over 1 year ago
Metadata Files
Readme

README.Rmd

---
output:
  md_document:
    variant: markdown_github
---



```{r, echo = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "README-"
)
```

## rKIN README
This package applies methods used to estimate animal homerange, but
instead of geospatial coordinates, we use isotopic coordinates. The estimation
methods include: 1) 2-dimensional bivariate normal kernel utilization density
estimator, 2) bivariate normal ellipse estimator, and 3) minimum convex polygon
estimator, all applied to stable isotope data. Additionally, functions to
determine niche area, polygon overlap between groups and levels (confidence
contours) and plotting capabilities.


**To install and load `rKIN` in R, run the following (requires the devtools package):**
  
  `devtools::install_github("salbeke/rKIN@master")`

`require(rKIN)`

GitHub Events

Total
  • Issues event: 4
  • Delete event: 2
  • Push event: 9
  • Pull request event: 10
  • Create event: 3
Last Year
  • Issues event: 4
  • Delete event: 2
  • Push event: 9
  • Pull request event: 10
  • Create event: 3

Committers

Last synced: almost 3 years ago

All Time
  • Total Commits: 43
  • Total Committers: 3
  • Avg Commits per committer: 14.333
  • Development Distribution Score (DDS): 0.442
Past Year
  • Commits: 19
  • Committers: 2
  • Avg Commits per committer: 9.5
  • Development Distribution Score (DDS): 0.105
Top Committers
Name Email Commits
Shannon E. Albeke s****e@u****u 24
William G Kirkpatrick w****2@u****u 17
William Kirkpatrick 4****d 2
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 19
  • Total pull requests: 20
  • Average time to close issues: 15 days
  • Average time to close pull requests: 5 minutes
  • Total issue authors: 5
  • Total pull request authors: 1
  • Average comments per issue: 0.42
  • Average comments per pull request: 0.0
  • Merged pull requests: 20
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 10
  • Average time to close issues: 9 minutes
  • Average time to close pull requests: 9 minutes
  • Issue authors: 2
  • Pull request authors: 1
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • lliW3rd (9)
  • salbeke (5)
  • AylenM (3)
  • rsbivand (1)
  • joanmoreaux (1)
Pull Request Authors
  • lliW3rd (20)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • ks * depends
  • maptools * depends
  • MASS * imports
  • RColorBrewer * imports
  • ggplot2 * imports
  • rgeos * imports
  • sp * imports
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests