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py-horned-owl

A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.

https://github.com/ontology-tools/py-horned-owl

Science Score: 57.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (9.5%) to scientific vocabulary

Keywords

owl python rust
Last synced: 6 months ago · JSON representation ·

Repository

A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.

Basic Info
Statistics
  • Stars: 15
  • Watchers: 3
  • Forks: 6
  • Open Issues: 6
  • Releases: 13
Topics
owl python rust
Created almost 5 years ago · Last pushed 6 months ago
Metadata Files
Readme License Citation

README.md

py-horned-owl

An experimental bridge from horned-owl to python using PyO3.

Installation

Published version

To install the published library:

pip install py_horned_owl

From sources

To build locally from sources, you will need Rust, PyO3 and Maturin.

Check out this repository: git clone https://github.com/ontology-tools/py-horned-owl/

In the directory py-horned-owl, create and activate a virtual Python environment:

virtualenv py-horned-owl

source bin/activate

Then you can get maturin to build the library and install it into the virtual Python environment with:

maturin develop

Usage

The library supports loading ontologies from .owl (RDF-XML) and .owx (OWL-XML) files via horned-owl's parsing functionality. ROBOT can transform ontologies that are in other OWL flavours into one of these formats using robot convert.

Example of simple usage:

``` import pyhornedowl

ontoname = "family.owx"

onto = pyhornedowl.open_ontology(ontoname)

print (f"Loaded ontology has {len(onto.getclasses())} classes.") print (f"Loaded ontology has {len(onto.getaxioms())} axioms.")

for c in onto.getclasses(): print(onto.getaxiomsforiri(c))

```

For more information please visit the documentation.

Citing

Phillip Lord, Björn Gehrke, Martin Larralde, Janna Hastings, Filippo De Bortoli, James A. Overton, James P. Balhoff, and Jennifer Warrender. Horned-OWL: Flying Further and Faster with Ontologies. In Special Issue on Resources for Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 2, pp. 9:1-9:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024) https://doi.org/10.4230/TGDK.2.2.9

Owner

  • Name: ontology-tools
  • Login: ontology-tools
  • Kind: organization

Citation (CITATION.cff) 

cff-version: 1.2.0
message: If you use this software, please cite both the article from preferred-citation and the software itself.
authors:
  - family-names: Lord
    given-names: Phillip
  - family-names: Gehrke
    given-names: Björn
  - family-names: Larralde
    given-names: Martin
  - family-names: Hastings
    given-names: Janna
  - family-names: De Bortoli
    given-names: Filippo
  - family-names: Overton
    given-names: James A.
  - family-names: Balhoff
    given-names: James P.
  - family-names: Warrender
    given-names: Jennifer
title: 'Horned-OWL: Flying Further and Faster with Ontologies'
version: 1.0.0
url: https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.2.9
doi: 10.4230/TGDK.2.2.9
date-released: '2024-03-27'
preferred-citation:
  authors:
    - family-names: Lord
      given-names: Phillip
    - family-names: Gehrke
      given-names: Björn
    - family-names: Larralde
      given-names: Martin
    - family-names: Hastings
      given-names: Janna
    - family-names: De Bortoli
      given-names: Filippo
    - family-names: Overton
      given-names: James A.
    - family-names: Balhoff
      given-names: James P.
    - family-names: Warrender
      given-names: Jennifer
  title: 'Horned-OWL: Flying Further and Faster with Ontologies'
  doi: 10.4230/TGDK.2.2.9
  url: https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.2.9
  type: article-journal
  pages: 9:1--9:14
  year: '2024'
  conference: {}
  publisher:
    name: Schloss Dagstuhl -- Leibniz-Zentrum für Informatik
    address: Dagstuhl, Germany

GitHub Events

Total
  • Create event: 6
  • Release event: 2
  • Issues event: 10
  • Watch event: 2
  • Issue comment event: 14
  • Push event: 34
  • Pull request event: 8
Last Year
  • Create event: 6
  • Release event: 2
  • Issues event: 10
  • Watch event: 2
  • Issue comment event: 14
  • Push event: 34
  • Pull request event: 8

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 7
  • Total pull requests: 4
  • Average time to close issues: 2 months
  • Average time to close pull requests: 7 days
  • Total issue authors: 2
  • Total pull request authors: 2
  • Average comments per issue: 0.71
  • Average comments per pull request: 0.0
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 7
  • Pull requests: 4
  • Average time to close issues: 2 months
  • Average time to close pull requests: 7 days
  • Issue authors: 2
  • Pull request authors: 2
  • Average comments per issue: 0.71
  • Average comments per pull request: 0.0
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • cmungall (8)
  • b-gehrke (2)
  • MGlauer (1)
Pull Request Authors
  • b-gehrke (9)
  • cmungall (3)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 322 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 4
  • Total versions: 20
  • Total maintainers: 2
pypi.org: py-horned-owl
  • Versions: 20
  • Dependent Packages: 0
  • Dependent Repositories: 4
  • Downloads: 322 Last month
Rankings
Dependent repos count: 7.5%
Dependent packages count: 10.1%
Average: 10.7%
Downloads: 14.4%
Maintainers (2)
jannahastings b-gehrke
Last synced: 6 months ago

Dependencies

.github/workflows/build.yml actions
  • actions/checkout v3 composite
  • actions/setup-python v4 composite
  • actions/upload-artifact v3 composite
  • dtolnay/rust-toolchain master composite
  • messense/maturin-action v1 composite
.github/workflows/release.yaml actions
  • actions/checkout v3 composite
  • actions/download-artifact v3 composite
  • ncipollo/release-action v1 composite
  • pypa/gh-action-pypi-publish release/v1 composite
Cargo.toml cargo
pyproject.toml pypi