scif

scientific filesystem: a filesystem organization for scientific software and metadata

https://github.com/vsoch/scif

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 2 DOI reference(s) in README
  • Academic publication links
  • Committers with academic emails
    4 of 9 committers (44.4%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.1%) to scientific vocabulary

Keywords

container containers docker metadata organization scientific-filesystems singularity standard
Last synced: 6 months ago · JSON representation

Repository

scientific filesystem: a filesystem organization for scientific software and metadata

Basic Info
  • Host: GitHub
  • Owner: vsoch
  • License: mpl-2.0
  • Language: Python
  • Default Branch: master
  • Homepage: https://sci-f.github.io/
  • Size: 569 KB
Statistics
  • Stars: 34
  • Watchers: 6
  • Forks: 12
  • Open Issues: 12
  • Releases: 2
Topics
container containers docker metadata organization scientific-filesystems singularity standard
Created about 8 years ago · Last pushed about 2 years ago
Metadata Files
Readme Changelog Contributing Funding License Code of conduct

README.md

Scientific Filesystem (SCI-F)

GitHub actions status CircleCI https://sci-f.github.io/img/logo/scif-slash-green.png

asciicast

The The Scientific Filesystem is an organizational format for scientific software and metadata. Our goals are centered around consistency, transparency, programmatic accessibility, and modularity. Read about the format and please contribute.

Citation

Vanessa Sochat; The Scientific Filesystem, GigaScience, Volume 7, Issue 5, 1 May 2018, giy023, https://doi.org/10.1093/gigascience/giy023

What is this?

This module will provide tools for generating and interacting with scientific filesystems, optimized for use on a host or inside a container.

License

This code is licensed under the Mozilla, version 2.0 or later LICENSE.

Owner

  • Name: Vanessasaurus
  • Login: vsoch
  • Kind: user

I'm the Vanessasaurus!

GitHub Events

Total
  • Watch event: 4
Last Year
  • Watch event: 4

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 233
  • Total Committers: 9
  • Avg Commits per committer: 25.889
  • Development Distribution Score (DDS): 0.077
Past Year
  • Commits: 12
  • Committers: 3
  • Avg Commits per committer: 4.0
  • Development Distribution Score (DDS): 0.667
Top Committers
Name Email Commits
vsoch v****t@s****u 215
Dustin Machi d****i@v****u 4
Dustin Machi d****s@v****u 4
pimpim 8****m 3
Scott McMillan s****n@n****m 2
Christopher Madan c****n 2
Satrajit Ghosh s****h@g****m 1
Denis Yuen d****n@o****a 1
Andreas Herten a****n@f****e 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 44
  • Total pull requests: 30
  • Average time to close issues: 3 days
  • Average time to close pull requests: about 16 hours
  • Total issue authors: 12
  • Total pull request authors: 8
  • Average comments per issue: 3.23
  • Average comments per pull request: 1.2
  • Merged pull requests: 30
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 5.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • vsoch (26)
  • bilke (5)
  • rdwrt (3)
  • saramonzon (2)
  • Saford91 (1)
  • dtrudg (1)
  • dmachi (1)
  • fbartusch (1)
  • samcmill (1)
  • tetron (1)
  • pgierz (1)
  • dkp (1)
Pull Request Authors
  • vsoch (21)
  • dmachi (4)
  • rdwrt (3)
  • cMadan (2)
  • AndiH (1)
  • samcmill (1)
  • satra (1)
  • denis-yuen (1)
Top Labels
Issue Labels
help wanted (2) bug (1) hacktoberfest (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 374 last-month
  • Total docker downloads: 282
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 39
  • Total maintainers: 1
pypi.org: scif

a filesystem organization for scientific software and metadata

  • Versions: 39
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 374 Last month
  • Docker Downloads: 282
Rankings
Docker downloads count: 1.7%
Dependent packages count: 7.3%
Forks count: 10.6%
Stargazers count: 11.4%
Average: 12.9%
Dependent repos count: 22.1%
Downloads: 24.3%
Maintainers (1)
Last synced: 6 months ago

Dependencies

.github/workflows/main.yml actions
  • actions/checkout v4 composite
.github/workflows/release.yaml actions
  • actions/checkout v4 composite
Dockerfile docker
  • continuumio/miniconda3 latest build
docs/examples/exit-on-install/Dockerfile docker
  • continuumio/miniconda3 latest build
scif/main/setup.py pypi
setup.py pypi