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gapfill

GapFill: gap filling functions for motion capture marker data

https://github.com/mkjung99/gapfill

Science Score: 23.0%

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    Found 7 DOI reference(s) in README
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    Low similarity (8.5%) to scientific vocabulary

Keywords

biomechanics gait-analysis gap-filling kinematic-analysis kinematics marker mocap motion-analysis motion-capture
Last synced: 6 months ago · JSON representation

Repository

GapFill: gap filling functions for motion capture marker data

Basic Info
  • Host: GitHub
  • Owner: mkjung99
  • License: mit
  • Language: Python
  • Default Branch: master
  • Homepage:
  • Size: 26.4 KB
Statistics
  • Stars: 9
  • Watchers: 2
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Topics
biomechanics gait-analysis gap-filling kinematic-analysis kinematics marker mocap motion-analysis motion-capture
Created over 5 years ago · Last pushed over 5 years ago
Metadata Files
Readme License

README.md

GapFill

GapFill: A Python module of gap filling functions for motion capture marker data

Description

Collection of several functions for gap filling and recovering of motion capture marker data

Installation

GapFill can be installed from PyPI using pip on Python>=3.7.

bash pip install gapfill

Usage

Rows of ndarray values for marker coordinates should be filled with numpy.nan for occluded (blocked) frames. ```python import gapfill as gf

numpy is required in order to provide necessary markers' coordinate values

import numpy as np

'fillmarkergap_interp()' function will update the given ndarray by filling its gaps using bspline interpolation

'tgtmkrpos0': a 2D (n, 3) ndarray of a target marker position to fill the gaps

'n' is the total number of frames

tgtmkrpos0 = np.array((n, 3), dtype=np.float32)

'ret0': either True or False, True if there is any frame updated, False if there is no frame updated

'updatedfrsmask0': a boolean ndarray to indicate which frames are updated

ret0, updatedfrsmask0 = gf.fillmarkergapinterp(tgtmkr_pos0)

'fillmarkergap_pattern()' function will update the given ndarray by filling its gaps using a donor marker

'tgtmkrpos1': a 2D (n, 3) ndarray of a target marker position to fill the gaps

'n' is the total number of frames

tgtmkrpos1 = np.array((n, 3), dtype=np.float32)

'dnrmkrpos': a 2D (n, 3) ndarray of a donor marker position

'n' is the total number of frames

dnrmkrpos = np.array((n, 3), dtype=np.float32)

'ret1': either True or False, True if there is any frame updated, False if there is no frame updated

'updatedfrsmask1': a boolean ndarray to indicate which frames are updated

ret1, updatedfrsmask1 = gf.fillmarkergappattern(tgtmkrpos1, dnrmkr_pos)

'fillmarkergap_rbt()' function will update the given ndarray by filling its gaps using a cluster of 3 markers

'tgtmkrpos2': a 2D (n, 3) ndarray of a target marker position to fill the gaps

'n' is the total number of frames

tgtmkrpos2 = np.array((n, 3), dtype=np.float32)

'clmkrpos': a 3D (m, n, 3) ndarray of the cluster markers

'm' (at least 3) is the number of markers, and 'n' is the total number of frames

clmkrpos = np.array((m, n, 3), dtype=np.float32)

'ret2': either True or False, True if there is any frame updated, False if there is no frame updated

'updatedfrsmask2': a boolean ndarray to indicate which frames are updated

ret2, updatedfrsmask2 = gf.fillmarkergaprbt(tgtmkrpos2, clmkr_pos) ```

Dependencies

References

How to cite this work

DOI

License

MIT

Owner

  • Name: Moon Ki Jung
  • Login: mkjung99
  • Kind: user
  • Location: Seoul, South Korea
  • Company: HMC

Senior Research Engineer

GitHub Events

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Last synced: 7 months ago

All Time
  • Total Commits: 14
  • Total Committers: 1
  • Avg Commits per committer: 14.0
  • Development Distribution Score (DDS): 0.0
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  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
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Moon Ki Jung m****g@o****m 14

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Last synced: 7 months ago

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Packages

  • Total packages: 1
  • Total downloads:
    • pypi 30 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 5
  • Total maintainers: 1
pypi.org: gapfill

GapFill: A Python module of gap filling functions for motion capture marker data

  • Versions: 5
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 30 Last month
Rankings
Dependent packages count: 10.0%
Forks count: 15.3%
Stargazers count: 17.7%
Average: 18.5%
Dependent repos count: 21.7%
Downloads: 27.6%
Maintainers (1)
mkjung
Last synced: 6 months ago