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metams

https://github.com/emsl-computing/metams

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 1 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: EMSL-Computing
  • License: bsd-2-clause
  • Language: Python
  • Default Branch: master
  • Size: 4.42 MB
Statistics
  • Stars: 3
  • Watchers: 4
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created about 6 years ago · Last pushed 11 months ago
Metadata Files
Readme License

README.md

Table of Contents

MetaMS

MetaMS is a repository of workflows for metabolomics data processing and annotation in association with the NMDC (National Microbiome Data Collaborative)

Current Version

3.2.1

Available Workflows

For information about data input, output, and execution for the individual workflows, follow the linked readmes above.

Disclaimer

This material was prepared as an account of work sponsored by an agency of the United States Government. Neither the United States Government nor the United States Department of Energy, nor Battelle, nor any of their employees, nor any jurisdiction or organization that has cooperated in the development of these materials, makes any warranty, express or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness or any information, apparatus, product, software, or process disclosed, or represents that its use would not infringe privately owned rights.

Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof, or Battelle Memorial Institute. The views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof.

             PACIFIC NORTHWEST NATIONAL LABORATORY
                          operated by
                            BATTELLE
                            for the
               UNITED STATES DEPARTMENT OF ENERGY
                under Contract DE-AC05-76RL01830

Owner

  • Name: EMSL Computing
  • Login: EMSL-Computing
  • Kind: organization

GitHub Events

Total
  • Delete event: 4
  • Push event: 90
  • Create event: 9
Last Year
  • Delete event: 4
  • Push event: 90
  • Create event: 9

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 59
  • Total Committers: 1
  • Avg Commits per committer: 59.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Corilo, Yuri c****o@p****v 59
Committer Domains (Top 20 + Academic)
pnnl.gov: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 31 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 8
  • Total maintainers: 1
pypi.org: metams

Data processing, and annotation for metabolomics analysis by low-resolution GC-MS

  • Versions: 8
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 31 Last month
Rankings
Dependent packages count: 10.0%
Dependent repos count: 21.7%
Forks count: 22.6%
Average: 24.7%
Stargazers count: 25.0%
Downloads: 44.3%
Maintainers (1)
corilo
Last synced: 11 months ago

Dependencies

requirements-dev.txt pypi
  • bumpversion * development
  • memory_profiler * development
  • pylint * development
  • pyprof2calltree * development
  • pytest * development
  • pytest-cov * development
  • twine * development
requirements.txt pypi
  • Click >=7.1.1
  • corems *
  • requests *
setup.py pypi
  • Click *
  • CoreMS *
  • requests *
.github/workflows/wdl_checker.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
Dockerfile docker
  • corilo/corems base-mono-pythonnet build