Science Score: 31.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic links in README
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (0.2%) to scientific vocabulary
Keywords
differential-expression
rna-seq-analysis
srna
Last synced: 6 months ago
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JSON representation
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Repository
Basic Info
- Host: GitHub
- Owner: mzytnicki
- Language: R
- Default Branch: master
- Size: 5.95 MB
Statistics
- Stars: 1
- Watchers: 2
- Forks: 1
- Open Issues: 2
- Releases: 0
Topics
differential-expression
rna-seq-analysis
srna
Created about 8 years ago
· Last pushed about 1 year ago
Metadata Files
Changelog
Citation
Owner
- Login: mzytnicki
- Kind: user
- Repositories: 10
- Profile: https://github.com/mzytnicki
Citation (CITATION)
citEntry(entry="article",
title = "Finding differentially expressed sRNA-Seq regions with srnadiff",
author = personList( as.person("Matthias Zytnicki"),
as.person("Ignacio González")),
year = 2021,
journal = "PLOS ONE",
doi = "10.1371/journal.pone.0256196",
volume = 16,
issue = 8,
pages = e0256196,
textVersion =
paste("Zytnicki, M., González, I.",
"Finding differentially expressed sRNA-Seq regions with srnadiff",
"PLOS ONE 16(8): e0256196 (2014)"))
GitHub Events
Total
- Push event: 7
- Fork event: 2
Last Year
- Push event: 7
- Fork event: 2
Dependencies
DESCRIPTION
cran
- R >= 3.6 depends
- BiocManager * imports
- BiocParallel * imports
- BiocStyle * imports
- DESeq2 * imports
- GenomeInfoDb * imports
- GenomicAlignments * imports
- GenomicFeatures * imports
- GenomicRanges * imports
- Gviz * imports
- IRanges * imports
- Rcpp >= 0.12.8 imports
- Rsamtools * imports
- S4Vectors * imports
- SummarizedExperiment * imports
- baySeq * imports
- devtools * imports
- edgeR * imports
- grDevices * imports
- methods * imports
- rtracklayer * imports
- BiocManager * suggests
- BiocStyle * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests