Recent Releases of scvi-tools

scvi-tools - scvi-tools 1.3.3

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] 7 months ago

scvi-tools - scvi-tools 1.3.2

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] 8 months ago

scvi-tools - scvi-tools 1.3.1.post1

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] 9 months ago

scvi-tools - scvi-tools 1.3.1

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] 9 months ago

scvi-tools - scvi-tools 1.3.0

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] 12 months ago

scvi-tools - scvi-tools 1.2.2.post2

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] about 1 year ago

scvi-tools - scvi-tools 1.2.2.post1

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] about 1 year ago

scvi-tools - scvi-tools 1.2.2

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] about 1 year ago

scvi-tools - scvi-tools 1.2.1

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] about 1 year ago

scvi-tools - scvi-tools 1.2.0

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] over 1 year ago

scvi-tools - scvi-tools 1.1.6.post2

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] over 1 year ago

scvi-tools - scvi-tools 1.1.6.post1

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] over 1 year ago

scvi-tools - scvi-tools 1.1.6

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] over 1 year ago

scvi-tools - scvi-tools 1.1.5

See the release notes for all changes.

This release is available via PyPi:

bash pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by github-actions[bot] over 1 year ago

scvi-tools - scvi-tools 1.1.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 1 year ago

scvi-tools - scvi-tools 1.1.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 1 year ago

scvi-tools - scvi-tools 1.1.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 almost 2 years ago

scvi-tools - scvi-tools 1.1.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 about 2 years ago

scvi-tools - scvi-tools 1.1.0-post.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 about 2 years ago

scvi-tools - scvi-tools 1.1.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 about 2 years ago

scvi-tools - scvi-tools 1.1.0-rc.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 about 2 years ago

scvi-tools - scvi-tools 1.1.0-rc.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 about 2 years ago

scvi-tools - scvi-tools 1.0.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 2 years ago

scvi-tools - scvi-tools 1.0.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 2 years ago

scvi-tools - scvi-tools 1.0.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 2 years ago

scvi-tools - scvi-tools 1.0.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 2 years ago

scvi-tools - scvi-tools 1.0.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 over 2 years ago

scvi-tools - scvi-tools 1.0.0-beta.0

Beta release. This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by martinkim0 almost 3 years ago

scvi-tools - scvi-tools 0.20.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 almost 3 years ago

scvi-tools - scvi-tools 0.20.2

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This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by martinkim0 almost 3 years ago

scvi-tools - scvi-tools 0.20.1

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This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.20.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.20.0-beta.2

Beta release. This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.20.0-beta.1

Beta release. This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.20.0-beta.0

Beta release. This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.20.0-alpha.0

ALPHA RELEASE. This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso about 3 years ago

scvi-tools - scvi-tools 0.19.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.19.0-alpha.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools==0.19.0a0

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.18.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.17.0-beta.0

See the beta release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.16.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.16.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 3 years ago

scvi-tools - scvi-tools 0.16.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.16.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.16.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.5

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 2 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.0-beta.0

Our first beta release. Release notes on the scvi-tools docs site (switch version to 0.15.0 beta 0)

- Python
Published by adamgayoso almost 4 years ago

scvi-tools - scvi-tools 0.15.0-alpha.0

This is our first alpha release for 0.15.0. While you can find this version on PyPI, we are using it for internal testing. A public beta will be available soon.

- Python
Published by adamgayoso about 4 years ago

scvi-tools - scvi-tools 0.14.6

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 4 years ago

scvi-tools - scvi-tools 0.14.5

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 4 years ago

scvi-tools - scvi-tools 0.14.4

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.14.3

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.14.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.14.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.14.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.13.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.12.2

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.12.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.12.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.11.0

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 4 years ago

scvi-tools - scvi-tools 0.10.1

See the release notes for all changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.10.0

See the release notes for all the new functionality, and breaking changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.9.1

See the release notes for all the new functionality, and breaking changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.9.0

See the release notes for all the new functionality, and breaking changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.9.0-beta.1

This is our second beta prerelease with our new PyTorch Lightning powered backend and is available via PyPi:

pip install scvi-tools==0.9.0b1

This release fixes a few bugs. Docs can be seen by changing from the stable to latest version on the docs website.

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.9.0-beta.0

This is our first beta prerelease with our new PyTorch Lightning powered backend and is available via PyPi:

pip install scvi-tools==0.9.0b0

Docs can be seen by changing from the stable to latest version on the docs website.

Please report any issues on GitHub.

- Python
Published by adamgayoso almost 5 years ago

scvi-tools - scvi-tools 0.9.0-alpha.2

This is our second prerelease with our new PyTorch Lightning powered backend and is available via PyPi:

pip install scvi-tools==0.9.0a2

This release adds our new Pyro integration and fixes bugs.

Docs can be seen by changing from the stable to latest version on the docs website.

Please report any issues on GitHub.

- Python
Published by adamgayoso about 5 years ago

scvi-tools - scvi-tools 0.9.0-alpha.1

This is our second prerelease with our new PyTorch Lightning powered backend and is available via PyPi:

pip install scvi-tools==0.9.0a1

This release adds the new PeakVI model.

Docs can be seen by changing from the stable to latest version on the docs website.

Please report any issues on GitHub.

- Python
Published by adamgayoso about 5 years ago

scvi-tools - scvi-tools 0.9.0-alpha.0

This is our first prerelease with our new PyTorch Lightning powered backend and is available via PyPi:

pip install scvi-tools==0.9.0a0

Docs can be seen by changing from the stable to latest version on the docs website.

Please report any issues on GitHub.

- Python
Published by adamgayoso about 5 years ago

scvi-tools - scvi-tools 0.8.1

See the release notes for changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 5 years ago

scvi-tools - scvi-tools 0.8.0

See the release notes for all the new functionality, and breaking changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

- Python
Published by adamgayoso about 5 years ago

scvi-tools - scvi-tools 0.8.0-beta.0

See the release notes for all the new functionality.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.1

This small update provides access to our new Discourse forum from the docs website.

This release is available via PyPi:

pip install scvi-tools

Conda release will follow (additional 1-3 days)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This is the first official release of scvi-tools.

This release is available via PyPi:

pip install scvi-tools

Conda release will follow (additional 1-3 days)

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0-beta.0

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This is the first beta release of scvi-tools.

This release is available via PyPi:

pip install scvi-tools

Conda release will take additional time.

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0-alpha.6

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this alpha release, we fixed various bugs in our DE functionality with sparse matrices, the memory configuration of anndata objects, automated the number of epochs for many models based on dataset size, fixed how we store categoricals so that anndatas set up with scvi-tools can be saved, fixed scvi.__version__, and other bug fixes.

This release is available via PyPi:

pip install scvi-tools

We are currently figuring out issues with our conda build.

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0-alpha.5

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this alpha release, we fixed various bugs in our DE functionality, restored proper defaults, reduced an extra pass on the train set per epoch when using early stopping, and fixed bugs with ScviConfig.

This release is available via PyPi:

pip install scvi-tools

We are currently figuring out issues with our conda build.

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0-alpha.4

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this release, we moved scvi.dataset to scvi.data and scvi.models to scvi.model.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago

scvi-tools - scvi-tools 0.7.0-alpha.3

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

- Python
Published by adamgayoso over 5 years ago