scarches - adding Zenodo DOI

- Jupyter Notebook
Published by M0hammadL almost 3 years ago

scarches - scArches v0.5.0

• Added expiMap
• Several bug fixes

- Jupyter Notebook
Published by Koncopd over 4 years ago

scarches - scArches v0.4.0

• Updated to most recent scvi-tools version
• Several bug fixes and performance/stability improvements

- Jupyter Notebook
Published by Cottoneyejoe95 almost 5 years ago

scarches - scArches v0.3.5

• Pin the version of scvi-tools.
• Update requirements.

- Jupyter Notebook
Published by Koncopd over 5 years ago

scarches - scArches v0.3.4

• Compatibility update for newest scvi-tools version

- Jupyter Notebook
Published by Cottoneyejoe95 over 5 years ago

scarches - scArches v0.3.3

• Fixed Bug if number of batches is bigger than latent dim
• Fixed Bug if only batch in data and mmd loss is on
• Better usability of mse loss models

- Jupyter Notebook
Published by Cottoneyejoe95 over 5 years ago

scarches - scArches v0.3.0 (PyTorch)

• switch to PyTorch

- Jupyter Notebook
Published by Koncopd over 5 years ago

scarches - scArches v0.2.2

• get_latent bug fixed
• ZINB loss calculation modified
• minor improvements

- Jupyter Notebook
Published by Naghipourfar over 5 years ago

scarches - TF 2.3 migration

Migrated to TensorFlow 2.3.0 with Keras 2.4.3

• minor improvements in the training function
• minor bugs fixed in restoring the model

- Jupyter Notebook
Published by Naghipourfar over 5 years ago

scarches - scArches v.0.1.5

Minor bugs fixed:

• removed tf-gpu 1.15.2 from requirements (not necessary in requirements)
• moved pancreas test to development branch
• setrandomseed used for networks in master branch (TF < 2)

- Jupyter Notebook
Published by Naghipourfar over 5 years ago

scarches - scArches v0.1.4

minor improvements:

• random seed added for all networks

- Jupyter Notebook
Published by Naghipourfar over 5 years ago

scarches -

• minor improvement in annotation functions
• signature of KNN function updated
• minor bugs fixed

- Jupyter Notebook
Published by Naghipourfar over 5 years ago

scarches -

Adaptors added Query adaptors can be uploaded to Zenodo

- Jupyter Notebook
Published by Naghipourfar almost 6 years ago

scarches - scArches with datasets

datasets module added minor improvements

- Jupyter Notebook
Published by Naghipourfar almost 6 years ago

scarches - First alpha release of scArches

- Jupyter Notebook
Published by MohsenNaghipourfar almost 6 years ago