Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
1 of 7 committers (14.3%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.9%) to scientific vocabulary
Keywords
bioconductor-package
methylation
single-cell-methylation
Keywords from Contributors
genomics
gene
transcriptome
proteomics
metagenomics
metabarcoding
amplicon
hmm
genome-sequencing
copy-number-variation
Last synced: 6 months ago
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JSON representation
Repository
Statistics
- Stars: 0
- Watchers: 5
- Forks: 0
- Open Issues: 0
- Releases: 0
Topics
bioconductor-package
methylation
single-cell-methylation
Created about 9 years ago
· Last pushed over 6 years ago
Metadata Files
Readme
README.md
scmeth
scmeth is a quality Control analysis package for methylation data. See the package vignette for various functions in the package.
Owner
- Name: aryeelab
- Login: aryeelab
- Kind: organization
- Repositories: 10
- Profile: https://github.com/aryeelab
GitHub Events
Total
Last Year
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Divyagash | s****h@y****m | 268 |
| Martin Aryee | m****e@g****m | 13 |
| Nitesh Turaga | n****a@g****m | 2 |
| vobencha | v****n@r****g | 2 |
| vobencha | v****a@g****m | 2 |
| LiNk-NY | m****9@g****m | 1 |
| ajdunford | a****d@b****g | 1 |
Committer Domains (Top 20 + Academic)
Dependencies
DESCRIPTION
cran
- R >= 3.5.0 depends
- AnnotationHub * imports
- BSgenome * imports
- Biostrings * imports
- DT * imports
- DelayedArray >= 0.5.15 imports
- GenomeInfoDb * imports
- GenomicRanges * imports
- HDF5Array >= 1.7.5 imports
- SummarizedExperiment >= 1.5.6 imports
- annotatr * imports
- bsseq * imports
- knitr * imports
- reshape2 * imports
- rmarkdown * imports
- stats * imports
- utils * imports
- BSgenome.Hsapiens.NCBI.GRCh38 * suggests
- BSgenome.Mmusculus.UCSC.mm10 * suggests
- Biobase * suggests
- BiocGenerics * suggests
- TxDb.Hsapiens.UCSC.hg38.knownGene * suggests
- ggplot2 * suggests
- ggthemes * suggests
- org.Hs.eg.db * suggests