Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
-
✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
-
○Committers with academic emails
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (13.2%) to scientific vocabulary
Keywords from Contributors
Repository
EEG/MEG Source Connectivity Toolbox in Python
Basic Info
- Host: GitHub
- Owner: scot-dev
- License: mit
- Language: Python
- Default Branch: main
- Homepage: http://scot-dev.github.io/scot-doc/index.html
- Size: 677 KB
Statistics
- Stars: 60
- Watchers: 8
- Forks: 23
- Open Issues: 29
- Releases: 3
Metadata Files
README.md
SCoT
SCoT is a Python package for EEG/MEG source connectivity estimation. In particular, it includes measures of directed connectivity based on vector autoregressive modeling.
Obtaining SCoT
Use the following command to install the latest release:
pip install scot
Documentation
Documentation is available at http://scot-dev.github.io/scot-doc/index.html.
Dependencies
SCoT requires numpy ≥ 1.8.2 and scipy ≥ 0.13.3. Optionally, matplotlib ≥ 1.4.0, scikit-learn ≥ 0.15.0, and mne ≥ 0.11.0 can be installed for additional functionality.
Examples
To run the examples on Linux, invoke the following commands inside the SCoT directory:
PYTHONPATH=. python examples/misc/connectivity.py
PYTHONPATH=. python examples/misc/timefrequency.py
etc.
Note that the example data from https://github.com/SCoT-dev/scot-data needs to be available. The scot-data package must be on Python's search path.
Building the docs
In February 2024 we managed to build the docs with the following package versions:
[tool.poetry.dependencies]
python = "^3.11"
sphinx = "^7.2.6"
matplotlib = "^3.8.3"
scipy = "^1.12.0"
scikit-learn = "^1.4.1.post1"
Note that these are the most recent versions at the moment, so it is likely that future versions will just work. When using a newer version of sphinx, it may be necessary to update the subrepository in doc/sphinxext/numpydoc.
Owner
- Name: scot-dev
- Login: scot-dev
- Kind: organization
- Repositories: 5
- Profile: https://github.com/scot-dev
GitHub Events
Total
- Watch event: 6
- Issue comment event: 1
- Pull request event: 1
- Fork event: 1
Last Year
- Watch event: 6
- Issue comment event: 1
- Pull request event: 1
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Martin | m****r@t****t | 279 |
| Clemens Brunner | c****r@g****m | 160 |
| mbillinger | f****e@g****m | 132 |
| kazemakase | k****e | 45 |
| mbillingr | m****r | 14 |
| kazemakase | f****e@g****m | 13 |
| Martin | z****e@g****t | 6 |
| Clemens Brunner | c****r@t****t | 4 |
| kazemakase | k****e@g****m | 2 |
| unknown | b****m@P****l | 1 |
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 54
- Total pull requests: 51
- Average time to close issues: about 1 month
- Average time to close pull requests: 7 months
- Total issue authors: 7
- Total pull request authors: 3
- Average comments per issue: 6.52
- Average comments per pull request: 6.8
- Merged pull requests: 40
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 1.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- cbrnr (32)
- mbillingr (13)
- dongqunxi (5)
- ivankott (1)
- NinaOmejc (1)
- ding00 (1)
- anewlearner (1)
Pull Request Authors
- cbrnr (36)
- mbillingr (13)
- ddsou (2)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 212 last-month
- Total dependent packages: 1
- Total dependent repositories: 2
- Total versions: 3
- Total maintainers: 1
pypi.org: scot
EEG/MEG Source Connectivity Toolbox
- Homepage: https://github.com/scot-dev/scot
- Documentation: https://scot.readthedocs.io/
- License: MIT
-
Latest release: 0.2.1
published over 10 years ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v3 composite
- actions/setup-python v3 composite