multianalyzer
Rebinning of powder diffraction data taken with multiple analyzer crystals and a large area detector
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 5 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.5%) to scientific vocabulary
Repository
Rebinning of powder diffraction data taken with multiple analyzer crystals and a large area detector
Basic Info
- Host: GitHub
- Owner: kif
- License: mit
- Language: Jupyter Notebook
- Default Branch: main
- Size: 4.1 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 2
- Open Issues: 6
- Releases: 3
Metadata Files
README.md
Multianalyzer
Rebinning of powder diffraction data taken with multiple analyzer crystals and a large area detector
This project is about the rebinning of data comming from the high resolution powder diffraction beamline (ID22) at the ESRF. It implements the math which are described in J. Appl. Cryst. (2021). 54, 1088-1099.
There are two implementations, Cython parallelized with OpenMP and OpenCL running on GPU. The later is faster.
The main executable is id22rebin which takes a BLISS-HDF5 file with ROI-collections in it (as generated on the ID22 beamline) and rebins the intensities
of the diffeent ROI, after calculating their precise position.
The geometry is described in an output file from TOPAS.
Intensities are grouped per analyzer crystal and per column (depth dependent) and need to be normalized.
Installation
pip install multianalyzer
Development version:
git clone https://github.com/kif/multianalyzer
cd multianalyzer
pip install -r requirements.txt
pip install .
The tests are only validating input file reading.
Owner
- Name: Jerome Kieffer
- Login: kif
- Kind: user
- Location: Grenoble
- Company: ESRF
- Website: http://www.terre-adelie.org
- Repositories: 64
- Profile: https://github.com/kif
GitHub Events
Total
- Create event: 3
- Release event: 1
- Issues event: 2
- Issue comment event: 4
- Push event: 10
- Pull request review event: 1
- Pull request event: 3
Last Year
- Create event: 3
- Release event: 1
- Issues event: 2
- Issue comment event: 4
- Push event: 10
- Pull request review event: 1
- Pull request event: 3
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Jerome Kieffer | j****r@e****r | 49 |
| Jérôme Kieffer | j****r@t****g | 38 |
| woutdenolf | w****f@u****t | 6 |
| Jerome Kieffer | g****b@t****g | 2 |
| Operator for ID22 | o****2@d****r | 2 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 11
- Total pull requests: 17
- Average time to close issues: 2 months
- Average time to close pull requests: about 2 months
- Total issue authors: 2
- Total pull request authors: 3
- Average comments per issue: 0.45
- Average comments per pull request: 0.71
- Merged pull requests: 15
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 3
- Average time to close issues: N/A
- Average time to close pull requests: 4 days
- Issue authors: 0
- Pull request authors: 2
- Average comments per issue: 0
- Average comments per pull request: 0.67
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- kif (8)
- woutdenolf (4)
Pull Request Authors
- kif (12)
- woutdenolf (7)
- tacaswell (4)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 116 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 2
- Total maintainers: 1
pypi.org: multianalyzer
Rebinning of powder diffraction data taken with multiple analyzer crystals and a large area detector
- Documentation: https://multianalyzer.readthedocs.io/
- License: Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: multianalyzer Upstream-Contact: Jérôme Kieffer <kieffer@esrf.fr> Source: https://github.com/kif/multianalyzer/releases/tag/v0.5.0 Files-Excluded: third_party Files: * Copyright: 2021-2023 Jerome Kieffer European Synchrotron Radiation Facility 71 Avenue des Martyrs 38000 Grenoble, France License: MIT License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
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Latest release: 0.7.0
published over 1 year ago
Rankings
Maintainers (1)
Dependencies
- for *
- h5py *
- hdf5plugin *
- numpy *
- setuptools *
- cython *
- h5py *
- hdf5plugin *
- numpy *
- pyopencl *
- setuptools <60