Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
4 of 21 committers (19.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (3.9%) to scientific vocabulary
Keywords
numba
numpy
python
scipy
Keywords from Contributors
napari
novice
gtk
qt
tk
wx
Last synced: 6 months ago
·
JSON representation
Repository
Python module to analyse skeleton (thin object) images
Basic Info
- Host: GitHub
- Owner: jni
- License: bsd-3-clause
- Language: Python
- Default Branch: main
- Homepage: https://skeleton-analysis.org
- Size: 195 MB
Statistics
- Stars: 133
- Watchers: 6
- Forks: 42
- Open Issues: 65
- Releases: 9
Topics
numba
numpy
python
scipy
Created over 9 years ago
· Last pushed 8 months ago
Metadata Files
Readme
License
README.md
skan: skeleton analysis in Python
Python module to analyse skeleton (thin object) images
See the documentation at https://skeleton-analysis.org.
Owner
- Name: Juan Nunez-Iglesias
- Login: jni
- Kind: user
- Location: Melbourne, VIC, Australia
- Company: Monash eResearch Centre, Monash University
- Website: http://ilovesymposia.com
- Repositories: 319
- Profile: https://github.com/jni
GitHub Events
Total
- Create event: 14
- Release event: 4
- Issues event: 18
- Watch event: 12
- Delete event: 5
- Issue comment event: 46
- Push event: 49
- Pull request review comment event: 4
- Pull request review event: 4
- Pull request event: 22
- Fork event: 3
Last Year
- Create event: 14
- Release event: 4
- Issues event: 18
- Watch event: 12
- Delete event: 5
- Issue comment event: 46
- Push event: 49
- Pull request review comment event: 4
- Pull request review event: 4
- Pull request event: 22
- Fork event: 3
Committers
Last synced: 10 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Juan Nunez-Iglesias | j****n@u****u | 458 |
| James Ryan | 9****t | 5 |
| marlenedavitorialobo | E****l@1****3 | 4 |
| Adam Blanch | a****h@u****u | 4 |
| Lucy Liu | j****6@g****m | 4 |
| Neil Shephard | n****d@s****k | 4 |
| Ryan Ly | r****y@l****v | 3 |
| Genevieve Buckley | 3****y | 2 |
| Kushaan Gupta | g****n@r****m | 2 |
| taeke | t****n@l****l | 2 |
| Evan Strat | 5****s | 1 |
| Kevin Yamauchi | k****i@g****m | 1 |
| Marianne Corvellec | m****c@e****g | 1 |
| Marlene Elisa Da Vitoria Lobo | 4****9 | 1 |
| Théo Dumont | t****8@h****r | 1 |
| Tim Monko | 4****o | 1 |
| Zoltán Csáti | C****n | 1 |
| jarodhanko-crafco | 1****o | 1 |
| theo258 | 6****8 | 1 |
| CsatiZoltan | c****n@f****u | 1 |
| Erik Riedel | E****l@g****m | 1 |
Committer Domains (Top 20 + Academic)
unimelb.edu.au: 2
freemail.hu: 1
ens-lyon.org: 1
live.nl: 1
rediffmail.com: 1
lbl.gov: 1
sheffield.ac.uk: 1
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 69
- Total pull requests: 77
- Average time to close issues: 4 months
- Average time to close pull requests: about 2 months
- Total issue authors: 25
- Total pull request authors: 16
- Average comments per issue: 2.75
- Average comments per pull request: 2.05
- Merged pull requests: 65
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 9
- Pull requests: 11
- Average time to close issues: 12 days
- Average time to close pull requests: 4 days
- Issue authors: 7
- Pull request authors: 4
- Average comments per issue: 3.44
- Average comments per pull request: 1.27
- Merged pull requests: 10
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- jni (31)
- ns-rse (5)
- erberj (3)
- rly (3)
- alisterburt (3)
- ssavary (2)
- GenevieveBuckley (2)
- jarodhanko-crafco (2)
- dzeego (2)
- siddagra (1)
- matbb (1)
- piango (1)
- dani-lbnl (1)
- ArnimJenett (1)
- horsto (1)
Pull Request Authors
- jni (50)
- ns-rse (8)
- lucyleeow (6)
- jamesyan-git (5)
- kushaangupta (3)
- rly (3)
- habi (2)
- GenevieveBuckley (2)
- marlene09 (2)
- Erolf345 (2)
- snowformatics (1)
- kevinyamauchi (1)
- ssavary (1)
- mkcor (1)
- jarodhanko-crafco (1)
Top Labels
Issue Labels
good first issue (5)
bug (3)
documentation (2)
Pull Request Labels
deprecation (1)
api-change (1)
Packages
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 1
- Total dependent repositories: 5
- Total versions: 12
conda-forge.org: skan
skan: skeleton analysis in Python. Inspired by the "Analyze skeletons" Fiji plugin by Ignacio Arganda-Carreras.
- Homepage: http://github.com/jni/skan
- License: BSD-3-Clause
-
Latest release: 0.10.0
published over 4 years ago
Rankings
Dependent repos count: 14.8%
Average: 26.8%
Dependent packages count: 29.0%
Forks count: 29.4%
Stargazers count: 34.1%
Last synced:
6 months ago
Dependencies
.github/workflows/build-docs.yml
actions
- GabrielBB/xvfb-action v1 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- tlambert03/setup-qt-libs v1 composite
.github/workflows/deploy-docs.yml
actions
- GabrielBB/xvfb-action v1 composite
- JamesIves/github-pages-deploy-action 4.1.5 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- tlambert03/setup-qt-libs v1 composite
.github/workflows/make-release.yml
actions
- actions/checkout main composite
- actions/create-release latest composite
- actions/setup-python v2 composite
- actions/upload-release-asset v1.0.2 composite
- pypa/gh-action-pypi-publish v1.4.2 composite
.github/workflows/test.yml
actions
- actions/checkout v2 composite
- actions/setup-python v2 composite
- codecov/codecov-action v1 composite
pyproject.toml
pypi
- imageio >=2.10.1
- magicgui >=0.7.3
- matplotlib >=3.4
- networkx >=2.7
- numba >=0.53
- numpy >=1.21
- openpyxl >=2.6
- pandas >=2.0.2
- scikit-image >=0.17.1
- scipy >=1.7
- toolz >=0.10.0
- tqdm >=4.57.0