phylophlan - 3.1.1

• Fixes non-verbose execution bug when running phylophlanassignsgbs.py (previously phylophlan_metagenomic.py)

- Python
Published by fasnicar about 2 years ago

phylophlan -

• Phylogenetic pipeline in phylophlan.py improved thanks to users' feedback
• Taxonomic assignment of genomes and MAGs via phylophlan_assign_sgbs.py (previously phylophlan_metagenomic.py) improved with databases synced with MetaPhlAn and faster

- Python
Published by fasnicar over 2 years ago

phylophlan - 3.0.3

• Fixing and improving folders check, params in exception, empty MSA check, and input handling
• adding the --convert_N2gap param

- Python
Published by fasnicar almost 4 years ago

phylophlan - 3.0.2

• Downloads now from http://cmprod1.cibio.unitn.it
• Added sanity checks for the gene tree pipeline
• Added warning message when specifying ASTRAL in the config file generator as it should be manually configured

- Python
Published by fasnicar over 5 years ago

phylophlan - 3.0.1

- Python
Published by fasnicar over 5 years ago

phylophlan - 3.0

PhyloPhlAn 3.0

See readme for more information

- Python
Published by fasnicar almost 6 years ago

phylophlan - 1.0

Please use one of the following two links for downloading PhyloPhlAn 1.0 * phylophlan-1.0.zip * phylophlan-1.0.tar.bz2

NB: Please do not use the automatic links generated by GitHub below.

- Python
Published by fasnicar about 6 years ago