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pymuvr

Fast multi-unit Van Rossum spike train metric

https://github.com/epiasini/pymuvr

Science Score: 20.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 4 committers (25.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.7%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Fast multi-unit Van Rossum spike train metric

Basic Info
  • Host: GitHub
  • Owner: epiasini
  • License: gpl-3.0
  • Language: C++
  • Default Branch: master
  • Homepage:
  • Size: 157 KB
Statistics
  • Stars: 3
  • Watchers: 2
  • Forks: 5
  • Open Issues: 1
  • Releases: 3
Created almost 13 years ago · Last pushed about 3 years ago
Metadata Files
Readme License

README.rst 

pymuvr
======

Overview
--------
|status| |pipy_version| |doi|

A Python package for the fast calculation of Multi-unit Van Rossum
neural spike train metrics, with the kernel-based algorithm described
in Houghton and Kreuz, *On the efficient calculation of Van Rossum
distances* (Network: Computation in Neural Systems, 2012, 23,
48-58). This package started out as a Python wrapping of the original
C++ implementation given by the authors of the paper, and evolved from
there with bugfixes and improvements.

Documentation
-------------

Full documentation (with examples and full reference) is hosted at
http://pymuvr.readthedocs.org/.

Requirements
------------
- Python 2.7 or 3.x.
- NumPy>=1.7.
- C++ development tools and Standard Library (package `build-essential` on Debian).
- Python development tools (package `python-dev` on Debian).

Installation
------------
To install the latest release, run::

  pip install pymuvr

License
-------
This package is licensed under version 3 of the GPL or any later
version. See COPYING for details.

Getting the source
------------------
Source code for pymuvr is hosted at https://github.com/epiasini/pymuvr.


.. |doi| image:: https://zenodo.org/badge/12274732.svg
   :target: https://zenodo.org/badge/latestdoi/12274732
   :alt: digital object identifier (DOI)
   
.. |status| image:: https://travis-ci.org/epiasini/pymuvr.svg?branch=master
    :target: https://travis-ci.org/epiasini/pymuvr
    :alt: build status
    
.. |pipy_version| image:: https://img.shields.io/pypi/v/pymuvr.svg
    :target: https://pypi.python.org/pypi/pymuvr
    :alt: PyPI version

Owner

  • Name: Eugenio Piasini
  • Login: epiasini
  • Kind: user
  • Company: University of Pennsylvania

GitHub Events

Total
Last Year

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 130
  • Total Committers: 4
  • Avg Commits per committer: 32.5
  • Development Distribution Score (DDS): 0.023
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Eugenio Piasini e****i@u****k 127
Robert Pröpper r****r@g****m 1
Jonas Zimmermann p****t@j****e 1
Robert Pröpper r****r@g****m 1
Committer Domains (Top 20 + Academic)
jonaszimmermann.de: 1 ucl.ac.uk: 1

Issues and Pull Requests

Last synced: about 1 year ago

All Time
  • Total issues: 9
  • Total pull requests: 4
  • Average time to close issues: 14 days
  • Average time to close pull requests: 2 days
  • Total issue authors: 2
  • Total pull request authors: 2
  • Average comments per issue: 0.89
  • Average comments per pull request: 1.5
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • epiasini (8)
  • yzerlaut (1)
Pull Request Authors
  • rproepp (3)
  • zeeMonkeez (1)
Top Labels
Issue Labels
enhancement (4) bug (2)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 24 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 2
  • Total versions: 7
  • Total maintainers: 1
pypi.org: pymuvr

Multi-unit Van Rossum spike train metric

  • Versions: 7
  • Dependent Packages: 0
  • Dependent Repositories: 2
  • Downloads: 24 Last month
Rankings
Dependent packages count: 10.0%
Dependent repos count: 11.6%
Forks count: 14.2%
Average: 20.0%
Stargazers count: 27.8%
Downloads: 36.6%
Maintainers (1)
epiasini
Last synced: 12 months ago

Dependencies

docs/readthedocs_requirements.txt pypi
  • Sphinx >=1.2.2
  • breathe >=3.0.0
  • numpy >=1.7
setup.py pypi
  • numpy >=1.7