udkm1dsim
A Python Simulation Toolkit for 1D Ultrafast Dynamics in Condensed Matter
Science Score: 23.0%
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○CITATION.cff file
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○codemeta.json file
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✓DOI references
Found 4 DOI reference(s) in README -
✓Academic publication links
Links to: arxiv.org -
○Committers with academic emails
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○Scientific vocabulary similarity
Low similarity (13.8%) to scientific vocabulary
Repository
A Python Simulation Toolkit for 1D Ultrafast Dynamics in Condensed Matter
Basic Info
- Host: GitHub
- Owner: dschick
- License: mit
- Language: Python
- Default Branch: develop
- Homepage: http://udkm1dsim.readthedocs.io
- Size: 18.5 MB
Statistics
- Stars: 22
- Watchers: 6
- Forks: 17
- Open Issues: 47
- Releases: 8
Metadata Files
README.md
Welcome to udkm1Dsim
The udkm1Dsim toolbox is a collection of Python classes and routines to simulate the thermal, structural, and magnetic dynamics after laser excitation as well as the according X-ray scattering response in one-dimensional sample structures after ultrafast excitation.
The toolbox provides the capabilities to define arbitrary layered structures on the atomic level including a rich database of element-specific physical properties. The excitation of ultrafast dynamics is represented by an N-temperature-model which is commonly applied for ultrafast optical excitations. Structural dynamics due to thermal stresses are calculated by a linear-chain model of masses and springs. The implementation of magnetic dynamics can be easily accomplished by the user for the individual problem.
The resulting X-ray diffraction response is computed by kinematical or dynamical X-ray theory which can also include magnetic scattering.
The udkm1Dsim toolbox is highly modular and allows to introduce user-defined results at any step in the simulation procedure.
The udkm1Dsim toolbox was initially developed for MATLAB® in the Ultrafast Dynamics in Condensed Matter group of Prof. Matias Bargheer at the University of Potsdam, Germany. The MATLAB® source code is still available at github.com/dschick/udkm1DsimML.
The current toolbox, written in Python, is maintained by Daniel Schick at the Max-Born-Institute, Berlin, Germany.
Documentation
The documentation can be found at udkm1Dsim.readthedocs.io.
Citation
Please cite the current preprint if you use the toolbox in your own work:
D. Schick, udkm1Dsim - A Python toolbox for simulating 1D ultrafast dynamics in condensed matter, Comput. Phys. Commun. 266, 108031 (2021) (preprint).
You can also cite the original publication if appropriate:
D. Schick, A. Bojahr, M. Herzog, R. Shayduk, C. von Korff Schmising & M. Bargheer, udkm1Dsim - A Simulation Toolkit for 1D Ultrafast Dynamics in Condensed Matter, Comput. Phys. Commun. 185, 651 (2014) (preprint).
Installation
You can either install directly from pypi.org using the command
pip install udkm1Dsim
or if you want to work on the latest develop release you can clone udkm1Dsim from the main git repository:
git clone https://github.com/dschick/udkm1Dsim.git udkm1Dsim
To work in editable mode (source is only linked but not copied to the python site-packages), just do:
pip install -e ./udkm1Dsim
Or to do a normal install with
pip install ./udkm1Dsim
Optionally, you can also let pip install directly from the repository:
pip install git+https://github.com/dschick/udkm1Dsim.git
You can have the following optional installation to enable parallel computations, unit tests, as well as building the documentation:
pip install udkm1Dsim[parallel]
pip install udkm1Dsim[testing]
pip install udkm1Dsim[documentation]
Contribute & Support
If you are having issues please let us know via the issue tracker.
You can also ask questions, share ideas, or engage with community members via the discussions.
You can contribute to the project via pull-requests following the GitHub flow concept.
License
The project is licensed under the MIT license.
Owner
- Name: Daniel Schick
- Login: dschick
- Kind: user
- Location: Berlin, Germany
- Company: Max-Born-Institute Berlin
- Repositories: 30
- Profile: https://github.com/dschick
GitHub Events
Total
- Issues event: 2
- Watch event: 1
- Issue comment event: 8
- Pull request event: 4
- Fork event: 1
Last Year
- Issues event: 2
- Watch event: 1
- Issue comment event: 8
- Pull request event: 4
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Daniel Schick | s****l@g****m | 516 |
| Daniel Schick | s****k@m****e | 141 |
| Nilodirf | 1****f | 15 |
| EmCeBeh | m****b@r****e | 8 |
| Daniel Schick | d****k | 8 |
| Vivek U Unni | 3****i | 4 |
| Em Ce Beh | b****t@m****e | 3 |
| Theodor Secanell Holstad | t****d@g****m | 1 |
| Martin | 4****0 | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 12 months ago
All Time
- Total issues: 80
- Total pull requests: 61
- Average time to close issues: 5 months
- Average time to close pull requests: 10 days
- Total issue authors: 18
- Total pull request authors: 9
- Average comments per issue: 1.56
- Average comments per pull request: 0.75
- Merged pull requests: 49
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 5
- Pull requests: 6
- Average time to close issues: about 11 hours
- Average time to close pull requests: about 6 hours
- Issue authors: 3
- Pull request authors: 4
- Average comments per issue: 2.0
- Average comments per pull request: 1.33
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- dschick (46)
- EmCeBeh (10)
- AvonReppert (3)
- theodoho (3)
- kathinkagerlinger (2)
- rshayduk (2)
- Serj-R (2)
- Hegel991 (2)
- AleksUDKM (1)
- hannan0786 (1)
- cowalz (1)
- mamattern (1)
- jpudell (1)
- ivKberg (1)
- tox1c90 (1)
Pull Request Authors
- dschick (51)
- tox1c90 (5)
- EmCeBeh (4)
- cowalz (2)
- friweber (2)
- AleksUDKM (1)
- Nilodirf (1)
- theodoho (1)
- jpudell (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 61 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 21
- Total maintainers: 1
pypi.org: udkm1dsim
A Python Simulation Toolkit for 1D Ultrafast Dynamics in Condensed Matter
- Homepage: https://github.com/dschick/udkm1Dsim
- Documentation: https://udkm1dsim.readthedocs.io/
- License: MIT
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Latest release: 2.0.4
published almost 2 years ago
Rankings
Maintainers (1)
Dependencies
- IProgress *
- autodocsumm *
- ipykernel *
- ipywidgets *
- myst_nb *
- sphinx ==4.3
- sphinx-book-theme *
- sphinx_copybutton *
- sphinx_design *
- sphinxcontrib.bibtex *
- matplotlib >=2.0.0
- numpy >=1.18.2
- pint >=0.9
- scipy >=1.4.1
- sympy >=1.5.1
- tabulate *
- tqdm >=4.43.0
- actions/checkout v2 composite
- actions/setup-python v2 composite
- codecov/codecov-action v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite