unassigner - 1.1.0

Minor upgrades and an improved database file handling system. All db files are now created in ~/.unassigner/ by default. The --db_dir option can set this to a non-default location. The --type_strain_fasta option is still available to override this but is deprecated.

What's Changed

• Upgrade docs for commands by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/35
• Replace pairwise2 with PairwiseAligner by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/37
• Put all db files in .unassigner/ by default by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/40

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/1.0.2...1.1.0

- Python
Published by Ulthran over 1 year ago

unassigner - 1.0.2

Properly bump version in package in line with release. See 1.0.1 for changelog.

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/1.0.1...1.0.2

- Python
Published by Ulthran over 1 year ago

unassigner - 1.0.1

Minor update to address non-critical code quality issues and upgrade the parse_results function to handle NA values (which unassigner produces sometimes in its results).

What's Changed

• Use #fmt controllers for test_align.py linting by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/29
• Upgrade parse_results to handle NAs by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/31
• 32 address code quality issues in codacy report by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/33

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/1.0.0...1.0.1

- Python
Published by Ulthran over 1 year ago

unassigner - 1.0.0

What's Changed

• Update LTP to 08_2023 by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/24
• Prep 1.0.0 release by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/27

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/0.0.5...1.0.0

- Python
Published by Ulthran about 2 years ago

unassigner - 1.0.0.dev2

What's Changed

• Update LTP to 08_2023 by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/24
• Prep 1.0.0 release by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/27

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/0.0.5...1.0.0.dev2

- Python
Published by Ulthran about 2 years ago

unassigner - 1.0.0.dev1

What's Changed

• Update LTP to 08_2023 by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/24
• Prep 1.0.0 release by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/27

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/0.0.5...1.0.0.dev1

- Python
Published by Ulthran about 2 years ago

unassigner - 1.0.0.dev0

What's Changed

• Update LTP to 08_2023 by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/24
• Prep 1.0.0 release by @Ulthran in https://github.com/PennChopMicrobiomeProgram/unassigner/pull/27

Full Changelog: https://github.com/PennChopMicrobiomeProgram/unassigner/compare/0.0.5...1.0.0.dev0

- Python
Published by Ulthran about 2 years ago

unassigner - v0.0.5

What's Changed

• Download with python by @kylebittinger in https://github.com/kylebittinger/unassigner/pull/18
• Variable mismatch rate algorithm by @kylebittinger in https://github.com/kylebittinger/unassigner/pull/20
• Soft threshold algorithm by @kylebittinger in https://github.com/kylebittinger/unassigner/pull/21
• Moved to version LTP0921 by @ctanes in https://github.com/kylebittinger/unassigner/pull/22
• Add CI/CD by @Ulthran in https://github.com/kylebittinger/unassigner/pull/23

New Contributors

• @Ulthran made their first contribution in https://github.com/kylebittinger/unassigner/pull/23

Full Changelog: https://github.com/kylebittinger/unassigner/compare/0.0.3...0.0.5

- Python
Published by kylebittinger about 3 years ago

unassigner - Initial PyPI release

- Python
Published by kylebittinger about 7 years ago

unassigner - Trimragged script release

- Python
Published by kylebittinger about 7 years ago

unassigner - Initial release

- Python
Published by kylebittinger about 7 years ago