xia2
An expert system for automated reduction of X-ray diffraction data from macromolecular crystals
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
9 of 20 committers (45.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (10.9%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
An expert system for automated reduction of X-ray diffraction data from macromolecular crystals
Basic Info
- Host: GitHub
- Owner: xia2
- License: bsd-3-clause
- Language: Python
- Default Branch: main
- Homepage: https://xia2.github.io/
- Size: 36.9 MB
Statistics
- Stars: 20
- Watchers: 8
- Forks: 16
- Open Issues: 61
- Releases: 0
Topics
Metadata Files
README.md
xia2
xia2 is an expert system to perform X-ray diffraction data processing on your behalf, using your software with little or no input from you. It will correctly handle multi-pass, multi-wavelength data sets as described later but it is not a data processing package. Specifically, if you use xia2 in published work please include the references for the programs it has used, which are printed at the end of the output. The system was initially written to support remote access to synchrotron facilities, however it may prove useful to anyone using MX, for example:
- assisting new or novice users,
- giving a second opinion to experts,
- assisting busy users to allow them to focus on problem cases, or
- providing reproducible processing.
The last of these may be most useful for users in a pharmaceutical setting, or people wishing to test or benchmark equipment, for example beamline scientists. In all cases however the usage of the program is the same.
Website: https://xia2.github.io Source code: https://github.com/xia2/xia2 Support: xia2.support@gmail.com
Owner
- Name: xia2
- Login: xia2
- Kind: organization
- Website: http://xia2.blogspot.co.uk/
- Repositories: 11
- Profile: https://github.com/xia2
An expert system for automated reduction of X-Ray diffraction data from macromolecular crystals
GitHub Events
Total
- Issues event: 28
- Watch event: 2
- Delete event: 10
- Issue comment event: 47
- Push event: 95
- Pull request event: 66
- Pull request review event: 50
- Pull request review comment event: 37
- Fork event: 3
- Create event: 40
Last Year
- Issues event: 28
- Watch event: 2
- Delete event: 10
- Issue comment event: 47
- Push event: 95
- Pull request event: 66
- Pull request review event: 50
- Pull request review comment event: 37
- Fork event: 3
- Create event: 40
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Graeme Winter | g****r@g****m | 4,721 |
| rjgildea | r****a@d****k | 1,232 |
| Markus Gerstel | m****l@d****k | 683 |
| Peter Briggs | p****s@d****k | 160 |
| James Beilsten-Edmands | j****s@g****m | 122 |
| Richard Gildea | r****a | 71 |
| James Beilsten-Edmands | 3****s | 69 |
| Ben Williams | b****s | 66 |
| Nicholas Devenish | n****h@g****m | 48 |
| DiamondLightSource-build-server | D****r | 31 |
| James Parkhurst | j****t@d****k | 14 |
| David Waterman | d****n@s****k | 14 |
| David Waterman | d****n@g****m | 13 |
| David Waterman | d****a | 7 |
| Amy Thompson | 5****n | 3 |
| Irakli Sikharulidze | i****e@d****k | 2 |
| Cody | c****y@q****m | 2 |
| Richard Gildea | h****3@w****k | 1 |
| Dean Keeble | d****e@d****k | 1 |
| Jenkins | d****n@s****k | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 9 months ago
All Time
- Total issues: 56
- Total pull requests: 219
- Average time to close issues: 11 months
- Average time to close pull requests: 18 days
- Total issue authors: 16
- Total pull request authors: 14
- Average comments per issue: 1.52
- Average comments per pull request: 1.03
- Merged pull requests: 194
- Bot issues: 0
- Bot pull requests: 9
Past Year
- Issues: 16
- Pull requests: 80
- Average time to close issues: about 2 months
- Average time to close pull requests: 9 days
- Issue authors: 7
- Pull request authors: 9
- Average comments per issue: 0.44
- Average comments per pull request: 0.53
- Merged pull requests: 68
- Bot issues: 0
- Bot pull requests: 7
Top Authors
Issue Authors
- graeme-winter (15)
- dagewa (11)
- jbeilstenedmands (6)
- benjaminhwilliams (4)
- mysecondnameisdanger (3)
- rjgildea (3)
- bwithd (2)
- biochem-fan (2)
- jmholton (2)
- drmrw (1)
- amyjaynethompson (1)
- frmupe (1)
- wh277 (1)
- ndevenish (1)
- huwjenkins (1)
Pull Request Authors
- jbeilstenedmands (120)
- amyjaynethompson (28)
- ndevenish (22)
- dagewa (19)
- DiamondLightSource-build-server (14)
- graeme-winter (11)
- rjgildea (11)
- pre-commit-ci[bot] (11)
- Anthchirp (6)
- benjaminhwilliams (4)
- mpks (2)
- TiankunZhou (2)
- lgtm-com[bot] (1)
- keeble (1)
- lattaai4 (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 5 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 1
- Total maintainers: 1
pypi.org: xia2
An expert system for automated reduction of X-Ray diffraction data from macromolecular crystals
- Homepage: https://github.com/xia2/xia2
- Documentation: https://xia2.readthedocs.io/
- License: BSD license
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Latest release: 0.6.0
published about 7 years ago