automaticanalysis

Automatic Analysis (aa)

https://github.com/automaticanalysis/automaticanalysis

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
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codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
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DOI references
Found 5 DOI reference(s) in README
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Academic publication links
Links to: zenodo.org
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Academic email domains
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (15.5%) to scientific vocabulary

Keywords

big-data dataflow diffusion eeg fmri matlab neuroimaging parallel-computing pipeline workflow-automation workflow-engine

Last synced: 6 months ago · JSON representation

Repository

Automatic Analysis (aa)

Basic Info

Host: GitHub
Owner: automaticanalysis
License: mit
Language: MATLAB
Default Branch: master
Homepage: http://automaticanalysis.github.io
Size: 91 MB

Statistics

Stars: 74
Watchers: 18
Forks: 35
Open Issues: 33
Releases: 7

Topics

big-data dataflow diffusion eeg fmri matlab neuroimaging parallel-computing pipeline workflow-automation workflow-engine

Created almost 14 years ago · Last pushed over 1 year ago

Metadata Files

Readme License Code of conduct Zenodo

Automatic Analysis (aa) is a pipeline system for neuroimaging written primarily in Matlab. It supports SPM 12, as well as selected functions from other software packages (e.g., FSL, Freesurfer). The goal is to facilitate automatic, flexible, and replicable neuroimaging analyses through a comprehensive pipeline system.

The software was originally developed by Dr Rhodri Cusack for supporting research at the MRC Cognition and Brain Science Unit. It is made available to the academic community in the hope that it may prove useful.

Definitions: aa means the Automatic Analysis software package and any associated documentation whether electronic or printed.

License

Use of this software is subject to the terms of the license, found in the license.txt file distributed with this software.

Documentation

The best source for aa documentation is the github wiki at: https://github.com/automaticanalysis/automaticanalysis/wiki

A second website at http://automaticanalysis.github.io provides recent aa news and current events, as well as discussion of topics that might be of interest to aa developers.

Help and support

Please feel free to open a discusion thread or an issue here on GitHub if you want to make comment or suggestions or are having trouble getting aa to work.

Software updates

The master branch on github is only updated after testing, so this version is the one to use. Developer versions are maintained in each developer's aa fork on GitHub.

References and citation

For any papers that report data analyzed with aa, please include the GitHub repo URL and cite the aa paper:

Cusack R, Vicente-Grabovetsky A, Mitchell DJ, Wild CJ, Auer T, Linke AC, Peelle JE (2015) Automatic analysis (aa): Efficient neuroimaging workflows and parallel processing using Matlab and XML. Frontiers in Neuroinformatics 8:90. http://dx.doi.org/10.3389/fninf.2014.00090

Owner

Name: automatic analysis (aa)
Login: automaticanalysis
Kind: organization

Website: http://www.automaticanalysis.org
Repositories: 4
Profile: https://github.com/automaticanalysis

aa is a pipeline system for neuroimaging written primarily in Matlab

GitHub Events

Total

Issues event: 4
Watch event: 2
Issue comment event: 7
Push event: 1
Pull request review event: 5
Pull request review comment event: 4
Pull request event: 4

Last Year

Issues event: 4
Watch event: 2
Issue comment event: 7
Push event: 1
Pull request review event: 5
Pull request review comment event: 4
Pull request event: 4

Issues and Pull Requests

Last synced: 6 months ago

All Time

Total issues: 2
Total pull requests: 1
Average time to close issues: about 1 month
Average time to close pull requests: N/A
Total issue authors: 1
Total pull request authors: 1
Average comments per issue: 1.5
Average comments per pull request: 0.0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 2
Pull requests: 1
Average time to close issues: about 1 month
Average time to close pull requests: N/A
Issue authors: 1
Pull request authors: 1
Average comments per issue: 1.5
Average comments per pull request: 0.0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

TamerGezici (10)
benjybarnett (2)
jones-michael-s (1)

Pull Request Authors

TamerGezici (3)
jones-michael-s (3)
tiborauer (1)

Top Labels

Issue Labels

bug (9)

Pull Request Labels

Packages

Total packages: 1
Total downloads: unknown

Total dependent packages: 0
Total dependent repositories: 0
Total versions: 9

proxy.golang.org: github.com/automaticanalysis/automaticanalysis

Documentation: https://pkg.go.dev/github.com/automaticanalysis/automaticanalysis#section-documentation
License: mit
Latest release: v5.8.1+incompatible
published almost 4 years ago

Versions: 9
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 5.5%

Average: 5.6%

Dependent repos count: 5.8%