drexel_metadata_formatter

Reformats the metadata output file from drexel_metadata repo

https://github.com/hdr-bgnn/drexel_metadata_formatter

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

✓
CITATION.cff file
Found CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
✓
.zenodo.json file
Found .zenodo.json file
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DOI references
✓
Academic publication links
Links to: zenodo.org
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Academic email domains
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (4.5%) to scientific vocabulary

Last synced: 6 months ago · JSON representation ·

Repository

Reformats the metadata output file from drexel_metadata repo

Basic Info

Host: GitHub
Owner: hdr-bgnn
License: mit
Language: Python
Default Branch: main
Size: 16.6 KB

Statistics

Stars: 0
Watchers: 0
Forks: 0
Open Issues: 0
Releases: 2

Created over 3 years ago · Last pushed over 2 years ago

Metadata Files

Readme License Citation

README.md

drexelmetadataformatter

Reformats the metadata output file from the drexel_metadata repo.

Requirements

Python 3

Usage

``` usage: dm_formatter.py [-h] input output

Convert metadata json file to BGNN minnow project format.

positional arguments: input Path of input drexel_metadata format JSON metadata file. output Path of output BGNN minnow format JSON metadata file.

optional arguments: -h, --help show this help message and exit ```

Testing

The unit tests can be run with the following command: python3 -m unittest discover .

Owner

Name: Biology Guided Neural Networks
Login: hdr-bgnn
Kind: organization

Repositories: 10
Profile: https://github.com/hdr-bgnn

Citation (CITATION.cff)

cff-version: 1.0.0
date-released: "2023-05-30"
abstract: "Reformats the metadata output file from the drexel_metadata repo."
authors:
  - family-names: Tabarin
    given-names: Thibault
    orcid: "https://orcid.org/0000-0003-4256-849X"
  - family-names: Bradley
    given-names: John
    orcid: "https://orcid.org/0000-0003-3858-848X"
  - family-names: Lapp
    given-names: Hilmar
    orcid: "https://orcid.org/0000-0001-9107-0714"
identifiers:
  - description: "Snapshot of drexel_metadata_formatter: Version 0.0.1"
    type: doi
    value: 10.5281/zenodo.7987576
keywords:
  - "imageomics"
  - "metadata"
license: MIT
message: "If you use this software, please cite it using these metadata."
references:
  - authors:
      - family-names: Karnani
        given-names: Kevin
      - family-names: Pepper
        given-names: Joel
      - family-names: Bakis
        given-names: Yasin
      - family-names: Wang
        given-names: Xiaojun
      - family-names: "Bart, Jr."
        given-names: Henry
      - family-names: Breen
        given-names: "David E"
      - family-names: Greenberg
        given-names: Jane
    doi: 10.57967/hf/0904
    repository-code: "https://github.com/hdr-bgnn/drexel_metadata"
    title: Drexel-metadata-generator
    type: software
    version: 0.6
repository-code: "https://github.com/hdr-bgnn/drexel_metadata_formatter"
title: "Drexel metadata formatter"
version: 0.0.1

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