Paicos

Paicos: A Python package for analysis of (cosmological) simulations performed with Arepo - Published in JOSS (2024)

https://github.com/tberlok/paicos

Science Score: 100.0%

This score indicates how likely this project is to be science-related based on various indicators:

✓
CITATION.cff file
Found CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
✓
.zenodo.json file
Found .zenodo.json file
✓
DOI references
Found 6 DOI reference(s) in README and JOSS metadata
✓
Academic publication links
Links to: joss.theoj.org
✓
Committers with academic emails
1 of 6 committers (16.7%) from academic institutions
○
Institutional organization owner
✓
JOSS paper metadata
Published in Journal of Open Source Software

Keywords from Contributors

mesh

Scientific Fields

Mathematics Computer Science - 84% confidence

Last synced: 4 months ago · JSON representation ·

Repository

An object-oriented Python package for analysis of (cosmological) simulations performed with Arepo

Basic Info

Host: GitHub
Owner: tberlok
License: gpl-3.0
Language: Jupyter Notebook
Default Branch: main
Homepage:
Size: 9.77 MB

Statistics

Stars: 15
Watchers: 3
Forks: 3
Open Issues: 1
Releases: 9

Created over 3 years ago · Last pushed 4 months ago

Metadata Files

Readme Contributing License Citation Support

Paicos

An object-oriented Python package for analysis of (cosmological) simulations performed with Arepo.

Documentation and asking for help

Installation instructions and tips on how to get started can be found on readthedocs.

If you have questions not answered there or if you simply can't get things working, then please feel free to create an issue or to send an email to tberlok ad nbi.ku.dk.

Reporting issues and/or requesting features

Paicos uses GitHub Issues to track bugs and feature requests. Please search the existing issues before filing new issues to avoid duplicates.

Contributing

Contributions are very welcome indeed! Please see instructions here.

Citing

Please cite Paicos whenever you use it for your research. A Bibtex file can be found below: @article{Berlok_Paicos_A_Python_2024, author = {Berlok, Thomas and Jlassi, Léna and Puchwein, Ewald and Haugbølle, Troels}, doi = {10.21105/joss.06296}, journal = {Journal of Open Source Software}, month = apr, number = {96}, pages = {6296}, title = {{Paicos: A Python package for analysis of (cosmological) simulations performed with Arepo}}, url = {https://joss.theoj.org/papers/10.21105/joss.06296}, volume = {9}, year = {2024} }

Owner

Name: Thomas Berlok
Login: tberlok
Kind: user
Location: Germany
Company: Leibniz Institute for Astrophysics Potsdam (AIP)

Website: http://www.tberlok.dk
Repositories: 9
Profile: https://github.com/tberlok

Postdoctoral researcher in theoretical astrophysics

JOSS Publication

Paicos: A Python package for analysis of (cosmological) simulations performed with Arepo

Published

April 20, 2024

DOI

10.21105/joss.06296

Volume 9, Issue 96, Page 6296

Authors

Thomas Berlok

Niels Bohr Institute, University of Copenhagen, Denmark, Leibniz-Institut für Astrophysik Potsdam, Germany

Léna Jlassi

Leibniz-Institut für Astrophysik Potsdam, Germany

Ewald Puchwein

Leibniz-Institut für Astrophysik Potsdam, Germany

Troels Haugbølle

Niels Bohr Institute, University of Copenhagen, Denmark

Editor

Josh Borrow

Citation (CITATION.cff)

cff-version: "1.2.0"
authors:
- family-names: Berlok
  given-names: Thomas
  orcid: "https://orcid.org/0000-0003-0466-603X"
- family-names: Jlassi
  given-names: Léna
  orcid: "https://orcid.org/0009-0007-9039-294X"
- family-names: Puchwein
  given-names: Ewald
  orcid: "https://orcid.org/0000-0001-8778-7587"
- family-names: Haugbølle
  given-names: Troels
  orcid: "https://orcid.org/0000-0002-9422-8684"
contact:
- family-names: Berlok
  given-names: Thomas
  orcid: "https://orcid.org/0000-0003-0466-603X"
doi: 10.5281/zenodo.10994256
message: If you use this software, please cite our article in the
  Journal of Open Source Software.
preferred-citation:
  authors:
  - family-names: Berlok
    given-names: Thomas
    orcid: "https://orcid.org/0000-0003-0466-603X"
  - family-names: Jlassi
    given-names: Léna
    orcid: "https://orcid.org/0009-0007-9039-294X"
  - family-names: Puchwein
    given-names: Ewald
    orcid: "https://orcid.org/0000-0001-8778-7587"
  - family-names: Haugbølle
    given-names: Troels
    orcid: "https://orcid.org/0000-0002-9422-8684"
  date-published: 2024-04-20
  doi: 10.21105/joss.06296
  issn: 2475-9066
  issue: 96
  journal: Journal of Open Source Software
  publisher:
    name: Open Journals
  start: 6296
  title: "Paicos: A Python package for analysis of (cosmological)
    simulations performed with Arepo"
  type: article
  url: "https://joss.theoj.org/papers/10.21105/joss.06296"
  volume: 9
title: "Paicos: A Python package for analysis of (cosmological)
  simulations performed with Arepo"

GitHub Events

Total

Create event: 16
Commit comment event: 1
Issues event: 2
Watch event: 7
Delete event: 3
Issue comment event: 3
Push event: 55
Pull request review event: 3
Pull request event: 23

Last Year

Create event: 16
Commit comment event: 1
Issues event: 2
Watch event: 7
Delete event: 3
Issue comment event: 3
Push event: 55
Pull request review event: 3
Pull request event: 23

Committers

Last synced: 5 months ago

All Time

Total Commits: 657
Total Committers: 6
Avg Commits per committer: 109.5
Development Distribution Score (DDS): 0.05

Past Year

Commits: 37
Committers: 2
Avg Commits per committer: 18.5
Development Distribution Score (DDS): 0.054

Top Committers

Name	Email	Commits
Thomas Berlok	t**k@g**m	624
LenaJlassi	l**i@a**e	22
Thomas Berlok	b**k@n**w	6
dependabot[bot]	4****]	3
Troels Haugbølle	h**l@n**k	1
Lorenzo Maria Perrone	l**p@g**m	1

Committer Domains (Top 20 + Academic)

nbi.ku.dk: 1 nnewl3.newton21.nnew: 1 aip.de: 1

Issues and Pull Requests

Last synced: 4 months ago

All Time

Total issues: 27
Total pull requests: 61
Average time to close issues: 3 months
Average time to close pull requests: 3 days
Total issue authors: 4
Total pull request authors: 6
Average comments per issue: 1.0
Average comments per pull request: 0.21
Merged pull requests: 56
Bot issues: 0
Bot pull requests: 4

Past Year

Issues: 1
Pull requests: 10
Average time to close issues: 3 months
Average time to close pull requests: 12 days
Issue authors: 1
Pull request authors: 2
Average comments per issue: 1.0
Average comments per pull request: 0.4
Merged pull requests: 9
Bot issues: 0
Bot pull requests: 2

View more stats

Top Authors

Issue Authors

tberlok (15)
kyleaoman (9)
ttricco (1)
LorenzoLMP (1)

Pull Request Authors

tberlok (70)
dependabot[bot] (9)
lenajlassi (9)
LorenzoLMP (2)
dfm (2)
haugboel (2)

Top Labels

Issue Labels

enhancement (3) bug (2) good first issue (1) wontfix (1)

Pull Request Labels

dependencies (9) python (1)

Packages

Total packages: 1
Total downloads:
- pypi 511 last-month

Total dependent packages: 0
Total dependent repositories: 0
Total versions: 13
Total maintainers: 1

pypi.org: paicos

An object-oriented Python package for analysis of (cosmological) simulations performed with Arepo.

Homepage: https://github.com/tberlok/paicos
Documentation: https://paicos.readthedocs.io/
License: BSD 3-clause
Latest release: 0.1.17
published 5 months ago

Versions: 13
Dependent Packages: 0
Dependent Repositories: 0
Downloads: 511 Last month

Rankings

Dependent packages count: 9.6%

Average: 38.8%

Dependent repos count: 68.0%

Maintainers (1)

tberlok

Last synced: 4 months ago

Dependencies

.github/workflows/flake8.yml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/manylinux.yml actions

RalfG/python-wheels-manylinux-build v0.7.1-manylinux2014_x86_64 composite
actions/checkout v2 composite
actions/setup-python v1 composite

.github/workflows/pylint.yml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

docs/requirements.in pypi

ipython ==8.16.1
myst-parser ==2.0.0
nbsphinx ==0.9.3
sphinx ==7.2.6
sphinx-copybutton ==0.5.2
sphinx-rtd-theme ==1.3.0
sphinxcontrib-napoleon ==0.7

docs/requirements.txt pypi

alabaster ==0.7.13
appnope ==0.1.3
asttokens ==2.4.1
attrs ==23.1.0
babel ==2.13.1
backcall ==0.2.0
beautifulsoup4 ==4.12.2
bleach ==6.1.0
certifi ==2023.7.22
charset-normalizer ==3.3.2
decorator ==5.1.1
defusedxml ==0.7.1
docutils ==0.18.1
exceptiongroup ==1.1.3
executing ==2.0.1
fastjsonschema ==2.18.1
idna ==3.4
imagesize ==1.4.1
ipython ==8.16.1
jedi ==0.19.1
jinja2 ==3.1.2
jsonschema ==4.19.2
jsonschema-specifications ==2023.7.1
jupyter-client ==8.5.0
jupyter-core ==5.5.0
jupyterlab-pygments ==0.2.2
markdown-it-py ==3.0.0
markupsafe ==2.1.3
matplotlib-inline ==0.1.6
mdit-py-plugins ==0.4.0
mdurl ==0.1.2
mistune ==3.0.2
myst-parser ==2.0.0
nbclient ==0.8.0
nbconvert ==7.10.0
nbformat ==5.9.2
nbsphinx ==0.9.3
packaging ==23.2
pandocfilters ==1.5.0
parso ==0.8.3
pexpect ==4.8.0
pickleshare ==0.7.5
platformdirs ==3.11.0
pockets ==0.9.1
prompt-toolkit ==3.0.39
ptyprocess ==0.7.0
pure-eval ==0.2.2
pygments ==2.16.1
python-dateutil ==2.8.2
pyyaml ==6.0.1
pyzmq ==25.1.1
referencing ==0.30.2
requests ==2.31.0
rpds-py ==0.10.6
six ==1.16.0
snowballstemmer ==2.2.0
soupsieve ==2.5
sphinx ==7.2.6
sphinx-copybutton ==0.5.2
sphinx-rtd-theme ==1.3.0
sphinxcontrib-applehelp ==1.0.7
sphinxcontrib-devhelp ==1.0.5
sphinxcontrib-htmlhelp ==2.0.4
sphinxcontrib-jquery ==4.1
sphinxcontrib-jsmath ==1.0.1
sphinxcontrib-napoleon ==0.7
sphinxcontrib-qthelp ==1.0.6
sphinxcontrib-serializinghtml ==1.1.9
stack-data ==0.6.3
tinycss2 ==1.2.1
tornado ==6.3.3
traitlets ==5.13.0
urllib3 ==2.0.7
wcwidth ==0.2.9
webencodings ==0.5.1

pyproject.toml pypi

requirements.txt pypi

astropy >=4.3
cython *
h5py *
matplotlib *
numpy *
pytest *
pytest-order *
scipy >=1.7.3

setup.py pypi

astropy *
h5py *
numpy *
scipy *

Paicos

Science Score: 100.0%

Keywords from Contributors

Scientific Fields

Repository

Basic Info

Statistics

Metadata Files

README.md

Paicos

Documentation and asking for help

Reporting issues and/or requesting features

Contributing

Citing

Owner

JOSS Publication

Paicos: A Python package for analysis of (cosmological) simulations performed with Arepo

Authors

Editor

Tags

Citation (CITATION.cff)

GitHub Events

Total

Last Year

Committers

All Time

Past Year

Top Committers

Committer Domains (Top 20 + Academic)

Issues and Pull Requests

All Time

Past Year

Top Authors

Issue Authors

Pull Request Authors

Top Labels

Issue Labels

Pull Request Labels

Packages

pypi.org: paicos

Rankings

Maintainers (1)

Dependencies