pacbio-hifi-genome-assembly-using-hifiasm
Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.
https://github.com/australianbiocommons/pacbio-hifi-genome-assembly-using-hifiasm
Science Score: 57.0%
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✓CITATION.cff file
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✓codemeta.json file
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✓.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Scientific vocabulary similarity
Low similarity (3.4%) to scientific vocabulary
Keywords
Repository
Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.
Basic Info
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- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 1
- Releases: 3
Topics
Metadata Files
README.md
PacBio HiFi genome assembly using hifiasm v2.1
General usage recommendations
Please see the Genome assembly with hifiasm on Galaxy Australia guide.
See change log
Acknowledgements
The workflow & the doc_guidelines template used are supported by the Australian BioCommons via Bioplatforms Australia funding, the Australian Research Data Commons (https://doi.org/10.47486/PL105) and the Queensland Government RICF programme. Bioplatforms Australia and the Australian Research Data Commons are enabled by the National Collaborative Research Infrastructure Strategy (NCRIS).
Owner
- Name: AustralianBioCommons
- Login: AustralianBioCommons
- Kind: organization
- Email: systems@biocommons.org.au
- Website: https://www.biocommons.org.au/
- Repositories: 17
- Profile: https://github.com/AustralianBioCommons
Documentation for the development, deployment and/or optimisation of key community-endorsed bioinformatics tools and workflows
Citation (CITATION.cff)
cff-version: 2.1.0
message: "If you use this workflow, please cite it as below."
authors:
- family-names: "Price"
given-names: "Gareth"
orcid: "https://orcid.org/0000-0003-2439-8650"
- family-names: "Farquharson"
given-names: "Katherine"
orcid: "https://orcid.org/0000-0002-9009-7453"
title: "PacBio-HiFi-genome-assembly-using-hifiasm"
version: 2.1.0
doi: 10.48546/WORKFLOWHUB.WORKFLOW.221.3
date-released: 2022-10-21