zoolog - zoolog v1.1.0

1. Added Russell's standard for Canis lupus.
2. Included genus Canis in the taxonomy and in the taxon thesaurus.
3. Included new entries in the measure and element thesauri.
4. Documentation generated with the updated version of roxygen2 (7.2.1) avoiding notes on CRAN of previous zoolog version for devel platforms.

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Published by josempozo almost 4 years ago

zoolog - zoolog v1.0.1

1. Completed the zoologTaxonomy as a new functionality structuring the taxonomy hierarchy for the taxa used in the references.
2. New functions Subtaxonomy, SubtaxonomySet, and GetTaxaIn. All of them taking into account the zoologThesaurus$taxon
3. Added new categories in zoologThesaurus$taxon to include also genera, in addition to taxa.
4. Integrated the zoologTaxonomy into the function LogRatios. This allows the automatic detection of data and reference sharing the same genus, although of different taxa.
5. Extended vignettes to incorporate description and illustration of the new functionalities.
6. Added several tests for the new functionalities: SubtaxonomySet function and LogRatios warning messages and automatic detection of cases with same genus but different taxon from reference.
7. Corrected some entries in example dataset, dataValenzuelaLamas2008.
8. Corrected bug on WriteThesaurusSet.
9. Davis’ standard SD, equivalent to Von den Driesch’s DD, has been denoted as Davis.SD in order to resolve its incompatibility with Von den Driesch’s SD. This has been modified in Davis' reference for sheep and added to the thesaurus for measures.
10. Added reference "Steppan" for Bos primigenius. The standards are obtained from the same specimen as the reference "Degerbol", but with new and more standandard measures.

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Published by josempozo about 4 years ago

zoolog - zoolog v0.4.1

1. Clarify in the documentation that log ratios are defined using base 10 logarithms.
2. All functions processing dataframes (LogRatios, RemoveNaCases, CondenseLogs, StandardizeDataSet) are now more robust to input data including additional S3 classes (previously giving errors). The additional classes are also passed to the output.

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Published by josempozo almost 5 years ago

zoolog - zoolog v0.4.0

1. Improved structure of function CondenseLogs. Now the methods are defined outside the function in a non-exported list of functions (condenseMethod). Now, CondenseLogs can also accept a user-defined function.
2. In addition, corrected bug appearing when the method average was applied to a group with only one present measure log-ratio.
3. Added some entries to the thesauri.
4. Changed the priority order in CondenseLogs following users feedback. Now "BT" has priority over "Bd" as representative of Width.

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Published by josempozo almost 5 years ago

zoolog - zoolog v0.3.1

Patch correcting incompatibility with systems using Latin-1 encoding.

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Published by josempozo about 5 years ago

zoolog - zoolog v0.3.0

New version with 5 additional references, more complete thesaurus, and more systematic documentation of references. Also more robust version of function CondenseLogs. Second version published in CRAN.

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Published by josempozo over 5 years ago

zoolog - zoolog v0.2.1

First version published in CRAN.

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Published by josempozo over 5 years ago