foodon

The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.

https://github.com/foodontology/foodon

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    1 of 11 committers (9.1%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (12.4%) to scientific vocabulary

Keywords

agriculture food obofoundry ontology owl

Keywords from Contributors

obo annotation biocuration bioinformatics life-sciences ontology-registry open-science semantic-web continuous-integration monarchinitiative
Last synced: 9 months ago · JSON representation

Repository

The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.

Basic Info
  • Host: GitHub
  • Owner: FoodOntology
  • License: cc-by-4.0
  • Language: Python
  • Default Branch: master
  • Homepage:
  • Size: 329 MB
Statistics
  • Stars: 201
  • Watchers: 17
  • Forks: 37
  • Open Issues: 81
  • Releases: 25
Topics
agriculture food obofoundry ontology owl
Created about 10 years ago · Last pushed 9 months ago
Metadata Files
Readme Contributing License Code of conduct

README.Md

FOODON

Build Status

FoodOn Food Ontology

Description: FoodOn, the food ontology, contains vocabulary for naming food materials and their anatomical and taxonomic origins, from raw harvested food to processed food products, for humans and domesticated animals. As an open-source inter-agency supported project, it provides a neutral and ontology-driven standard for government agencies, industry, nonprofits and consumers to name and reference food products and their components throughout the food supply chain. In partnership with other ontologies, the project also explores the semantic bedrock of vocabulary involved in modelling food composition, food processing, nutrition and food related disease.

FoodOn was initially based on a conversion of the LanguaL.org food indexing thesaurus, integrated with OBOFoundry ontology terms from UBERON, ChEBI, and NCBITaxon and others.

More information can be found at http://obofoundry.org/ontology/foodon

Our FoodOn.org website introduces FoodOn and its design and community.

Versions

Stable release versions

The latest version of the ontology can always be found at:

http://purl.obolibrary.org/obo/foodon.owl

(note this will not show up until the request has been approved by obofoundry.org)

Editors' version

Editors of this ontology should use the edit version, src/ontology/foodon-edit.owl

Contact

  • Please use this GitHub repository's Issue tracker to request new terms/classes or report errors or specific concerns related to the ontology.
  • Join our mailing list
  • Email us at info[at]genepio.org

To view

An easy place to browse FoodOn is at https://www.ebi.ac.uk/ols/ontologies/foodon. As well the URI's of terms in the ontology resolve to the comprehensive Ontobee ontology lookup service. It is organized according to the upper level BFO ontology, so most terms can be browsed by starting at the BFO "entity" term (e.g. in Ontobee).

Acknowledgements

This ontology repository was created using the Ontology Development Kit (ODK).

License: CC BY 4.0

Owner

  • Name: Food Ontology
  • Login: FoodOntology
  • Kind: organization

FoodOn, an OBOFoundry ontology, represents organism food sources, food products and other facet descriptors for human and domesticated animal food.

GitHub Events

Total
  • Create event: 13
  • Release event: 3
  • Issues event: 30
  • Watch event: 23
  • Delete event: 2
  • Issue comment event: 56
  • Push event: 80
  • Pull request review comment event: 3
  • Pull request review event: 6
  • Pull request event: 13
  • Gollum event: 1
  • Fork event: 1
Last Year
  • Create event: 13
  • Release event: 3
  • Issues event: 30
  • Watch event: 23
  • Delete event: 2
  • Issue comment event: 56
  • Push event: 80
  • Pull request review comment event: 3
  • Pull request review event: 6
  • Pull request event: 13
  • Gollum event: 1
  • Fork event: 1

Committers

Last synced: 9 months ago

All Time
  • Total Commits: 1,387
  • Total Committers: 11
  • Avg Commits per committer: 126.091
  • Development Distribution Score (DDS): 0.679
Past Year
  • Commits: 134
  • Committers: 2
  • Avg Commits per committer: 67.0
  • Development Distribution Score (DDS): 0.127
Top Committers
Name Email Commits
Damion Dooley d****y@b****a 445
Damion Dooley d****y@s****a 428
Anoosha Sehar 6****r 392
Rhiannon Cameron 4****i 40
cbarcl01 7****1 31
Pier Luigi Buttigieg p****g@g****m 19
Kai Blumberg k****g@e****u 18
Nico Matentzoglu n****u@g****m 8
ivansg44 i****4@g****m 3
Chris Mungall c****m@b****g 2
Lauren 4****n 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 9 months ago

All Time
  • Total issues: 118
  • Total pull requests: 43
  • Average time to close issues: 4 months
  • Average time to close pull requests: 6 days
  • Total issue authors: 39
  • Total pull request authors: 6
  • Average comments per issue: 4.53
  • Average comments per pull request: 0.67
  • Merged pull requests: 33
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 22
  • Pull requests: 14
  • Average time to close issues: 7 days
  • Average time to close pull requests: 2 days
  • Issue authors: 5
  • Pull request authors: 1
  • Average comments per issue: 0.5
  • Average comments per pull request: 0.0
  • Merged pull requests: 11
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • ddooley (24)
  • cmrn-rhi (11)
  • GH-Emily (9)
  • DianeKEPR (7)
  • michaelehowe2 (7)
  • maweber-bia (6)
  • kaiiam (4)
  • laurenechan (4)
  • cmungall (4)
  • matentzn (3)
  • KaylaPenn (3)
  • balhoff (3)
  • jarretinha (2)
  • marieALaporte (2)
  • rachhuntley (2)
Pull Request Authors
  • Anoosha-Sehar (32)
  • kaiiam (8)
  • ddooley (5)
  • matentzn (5)
  • cmrn-rhi (3)
  • cbarcl01 (1)
Top Labels
Issue Labels
new term request (12) in progress (6) Wine Processes (6) Bug (3) design feedback (2) help wanted (2) Nutrition (2) USDA FDC (1) project proposal (1) Beer Processes (1) enhancement (1) Food Hazards (1)
Pull Request Labels
in progress (1)

Packages

  • Total packages: 2
  • Total downloads: unknown
  • Total dependent packages: 0
    (may contain duplicates)
  • Total dependent repositories: 0
    (may contain duplicates)
  • Total versions: 18
proxy.golang.org: github.com/foodontology/foodon
  • Versions: 9
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.4%
Average: 5.6%
Dependent repos count: 5.8%
Last synced: 9 months ago
proxy.golang.org: github.com/FoodOntology/foodon
  • Versions: 9
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.4%
Average: 5.6%
Dependent repos count: 5.8%
Last synced: 9 months ago