nwfscsurvey
Tool to pull and process NWFSC West Coast groundfish survey data for use in PFMC groundfish stock assessments
Science Score: 46.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
8 of 16 committers (50.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.8%) to scientific vocabulary
Keywords from Contributors
Repository
Tool to pull and process NWFSC West Coast groundfish survey data for use in PFMC groundfish stock assessments
Basic Info
- Host: GitHub
- Owner: pfmc-assessments
- Language: R
- Default Branch: main
- Homepage: http://pfmc-assessments.github.io/nwfscSurvey/
- Size: 10.6 MB
Statistics
- Stars: 11
- Watchers: 7
- Forks: 8
- Open Issues: 26
- Releases: 9
Metadata Files
README.md
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Installation
nwfscSurvey provides code for analysis of the Northwest Fisheries Science Center (NWFSC) West Coast Groundfish Bottom Trawl, NWFSC
slope, Alaska Fisheries Science Center (AFSC) slope, and AFSC Triennial surveys. Code within this package allows
for pulling of data from the NWFSC data warehouse, calculating the design-based
indices of abundance, visualization of data, and processing length- and age-composition data for use in West Coast groundfish stock assessment.
This code was developed for use by scientists at the NWFSC and is intended to work on the specific data products that we have access to using methods specific to the needs of this group.
r
install.packages("remotes")
remotes::install_github("pfmc-assessments/nwfscSurvey")
Package information
A website is now available for the package. The "Get started" tab provide general information on how to pull, visualize, and process survey data. Additionally, the "Reference" tab provides a detailed list of all available functions.
Owner
- Name: PFMC assessments
- Login: pfmc-assessments
- Kind: organization
- Repositories: 18
- Profile: https://github.com/pfmc-assessments
Repositories related to stock assessments for the Pacific Fishery Management Council
GitHub Events
Total
- Create event: 17
- Release event: 3
- Issues event: 24
- Watch event: 2
- Delete event: 13
- Issue comment event: 42
- Push event: 97
- Pull request review event: 13
- Pull request event: 41
- Fork event: 2
Last Year
- Create event: 17
- Release event: 3
- Issues event: 24
- Watch event: 2
- Delete event: 13
- Issue comment event: 42
- Push event: 97
- Pull request review event: 13
- Pull request event: 41
- Fork event: 2
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Chantel Wetzel | c****l@n****v | 431 |
| Chantel Wetzel | c****l@n****v | 118 |
| kellijohnson-NOAA | k****n@n****v | 65 |
| Ian Taylor | i****r@n****v | 40 |
| kellijohnson-NOAA | k****n@n****v | 24 |
| Eric Ward | e****d@n****v | 18 |
| allanhicks | f****s@g****m | 12 |
| John Wallace | J****e@n****v | 11 |
| Sean Anderson | s****n@s****a | 7 |
| Brian Langseth | b****h@n****v | 6 |
| Kiva Oken | k****n@g****m | 4 |
| Eric Ward | e****d | 3 |
| Maurice Goodman | g****e@g****m | 3 |
| James-Thorson | J****q@g****m | 3 |
| Kathryn Doering | k****g@n****v | 2 |
| Joshua Zahner | j****r@g****m | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 7 months ago
All Time
- Total issues: 81
- Total pull requests: 93
- Average time to close issues: 9 months
- Average time to close pull requests: 18 days
- Total issue authors: 10
- Total pull request authors: 9
- Average comments per issue: 2.94
- Average comments per pull request: 1.17
- Merged pull requests: 82
- Bot issues: 0
- Bot pull requests: 30
Past Year
- Issues: 14
- Pull requests: 38
- Average time to close issues: 2 days
- Average time to close pull requests: 7 days
- Issue authors: 5
- Pull request authors: 7
- Average comments per issue: 1.5
- Average comments per pull request: 0.68
- Merged pull requests: 34
- Bot issues: 0
- Bot pull requests: 11
Top Authors
Issue Authors
- kellijohnson-NOAA (30)
- chantelwetzel-noaa (21)
- iantaylor-NOAA (11)
- brianlangseth-NOAA (6)
- ericward-noaa (6)
- okenk (3)
- Curt-Whitmire-NOAA (2)
- Ovec8hkin (2)
- eeholmes (1)
- github-actions[bot] (1)
- seananderson (1)
Pull Request Authors
- github-actions[bot] (38)
- chantelwetzel-noaa (30)
- kellijohnson-NOAA (20)
- iantaylor-NOAA (14)
- k-doering-NOAA (4)
- brianlangseth-NOAA (3)
- mcgoodman (2)
- okenk (2)
- Ovec8hkin (1)
Top Labels
Issue Labels
Pull Request Labels
Dependencies
- R >= 4.0 depends
- dplyr >= 1.0.0 depends
- chron * imports
- cowplot * imports
- ggmosaic >= 0.3.4 imports
- ggnewscale * imports
- ggokabeito * imports
- ggplot2 >= 3.0.0 imports
- glue * imports
- httr * imports
- janitor * imports
- jsonlite * imports
- lifecycle * imports
- purrr * imports
- reshape2 * imports
- rlang * imports
- stringr * imports
- tibble * imports
- tidyr * imports
- kableExtra * suggests
- knitr * suggests
- mapproj * suggests
- maps * suggests
- rmarkdown * suggests
- testthat * suggests
- usethis * suggests
- xtable * suggests